RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 DISC1C4P0D8 188 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 BOLA2-SMG1P6H3BVE0 249 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 KLK10O43240 276 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 GMDSO60547 372 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 LMX1BO60663 402 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 ICMTO60725 284 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 CDC14BO60729 498 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 WDR1O75083 606 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 CST4P01036 141 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 NRASP01111 189 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 CD74P04233 296 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 TPOP07202 933 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 DBHP09172 617 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 TMIGD3P0DMS9 266 aaPredicted RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 GTF2F2P13984 249 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 FAHP16930 419 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 STOMP27105 288 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 PMELP40967 661 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 ATP1B3P54709 279 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 RAB1AP62820 205 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 RPS27AP62979 156 aaKnown RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 FAM3AP98173 230 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 MAB21L1Q13394 359 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 UNC119Q13432 240 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 UBE2V2Q15819 145 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 GSG1Q2KHT4 349 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 SNAI3Q3KNW1 292 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 TBRG1Q3YBR2 411 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 ZFP69Q49AA0 526 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 NSUN5P2Q63ZY6 315 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 STEAP1BQ6NZ63 245 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 INO80CQ6PI98 192 aaPredicted RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 ASCL4Q6XD76 172 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 Q6ZT83 130 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 Q6ZTK2 550 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 NAA40Q86UY6 237 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 LIX1LQ8IVB5 337 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 ZNF584Q8IVC4 421 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 SAXO1Q8IYX7 474 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 PAQR4Q8N4S7 273 aaPredicted RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 DTX3Q8N9I9 347 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 CCDC107Q8WV48 283 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 TNFAIP8L1Q8WVP5 186 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 RAB3CQ96E17 227 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 BORCS8Q96FH0 119 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 POM121L2Q96KW2 1035 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 PRRT1Q99946 306 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 REPIN1Q9BWE0 567 aaKnown RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 METTL9Q9H1A3 318 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 LPAR5Q9H1C0 372 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 C20orf85Q9H1P6 137 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 MED28Q9H204 178 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 GHITMQ9H3K2 345 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 RHOFQ9HBH0 211 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 MYOZ1Q9NP98 299 aaPredicted RBP6.9□□□□□ -1.3
VMA21-203ENST00000477649 SLC2A8Q9NY64 477 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 ITGB1BP2Q9UKP3 347 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 PLEKHA6Q9Y2H5 1048 aa6.9□□□□□ -1.3
VMA21-203ENST00000477649 FAM186AA6NE01 2351 aa6.9□□□□□ -1.31
VMA21-203ENST00000477649 GVINP1Q7Z2Y8 2422 aa6.9□□□□□ -1.31
VMA21-203ENST00000477649 PTPRBP23467 1997 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CFAP47Q6ZTR5 3102 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A10PA6NDY2 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A18PA6NE21 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A16PA6NEW6 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A20PA6NIJ5 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A8PA6NJQ4 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A7PA6NKC0 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A22PA8MWA6 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A12PA8MX19 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A5PA8MXJ8 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A23PA8MXZ1 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 RAB3DO95716 219 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 MPIG6BO95866 241 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 IL18BPO95998 194 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 MT-ND4P03905 459 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A15PP0C7V4 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A13PP0C7W8 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A14PP0C7W9 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM90A24PP0C7X0 464 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CD79AP11912 226 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 HIST1H1DP16402 221 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 NAT1P18440 290 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 ERP29P30040 261 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 HOXC12P31275 282 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 UCNP55089 124 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 MTCP1P56278 107 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 GNG2P59768 71 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 UBE2NP61088 152 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 SRSF6Q13247 344 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 P2RY6Q15077 328 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CDK10Q15131 360 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 TBC1D28Q2M2D7 210 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CDNFQ49AH0 187 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 RNASE12Q5GAN4 147 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 SFRP5Q5T4F7 317 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 PLXDC2Q6UX71 529 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 TFAP2EQ6VUC0 442 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms