RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 ZNF747Q9BV97 191 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 SMURF1Q9HCE7 757 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 H2AFY2Q9P0M6 372 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-204ENST00000477531 DNAJB11Q9UBS4 358 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 LRP12Q9Y561 859 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 PCDHGB1Q9Y5G3 927 aa13.03□□□□□ -0.32
CLDN11-204ENST00000477531 SOX21Q9Y651 276 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-204ENST00000477531 TMEM269A0A1B0GVZ9 245 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 GPR37O15354 613 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 GSC2O15499 205 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 CRYBA1P05813 215 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 SFTPBP07988 381 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 SLC2A5P22732 501 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 GMFBP60983 142 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 ESRRGP62508 458 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 LRRC10Q5BKY1 277 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 WDR38Q5JTN6 314 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 SHISA2Q6UWI4 295 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 THAP5Q7Z6K1 395 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 OR5K1Q8NHB7 308 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 ASB17Q8WXJ9 295 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 OR5P3Q8WZ94 311 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.33
CLDN11-204ENST00000477531 PKP2Q99959 881 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 KLHDC2Q9Y2U9 406 aa13.02□□□□□ -0.33
CLDN11-204ENST00000477531 A0A0U1RQV5 110 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ZNF816-ZNF321PA0A0X1KG74 233 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 MDFIC2A0A1B0GVS7 189 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 NKX6-3A6NJ46 265 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 POM121CA8CG34 1229 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 HOXA3O43365 443 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 SPRY1O43609 319 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ZNF254O75437 659 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 MRPL3P09001 348 aaKnown RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 MMP9P14780 707 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ATP6V1B1P15313 513 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ACKR3P25106 362 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 DAPP51397 102 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 RIDAP52758 137 aaKnown RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 HCCSP53701 268 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ACTR3P61158 418 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 PTGES3Q15185 160 aaKnown RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ZNF829Q3KNS6 432 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 FAHD1Q6P587 224 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 CMTM4Q8IZR5 234 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 LHX4Q969G2 390 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 TBX15Q96SF7 602 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 CADM1Q9BY67 442 aaKnown RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 PPP1R3EQ9H7J1 279 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 UNKLQ9H9P5 680 aaKnown RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 KRT84Q9NSB2 600 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 HAO2Q9NYQ3 351 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 ENOPH1Q9UHY7 261 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 RPUSD1Q9UJJ7 312 aaKnown RBP13.01□□□□□ -0.33
CLDN11-204ENST00000477531 IKZF2Q9UKS7 526 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
CLDN11-204ENST00000477531 CENPVL3A0A0U1RRI6 287 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 G3V2T6 193 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 PSMD9O00233 223 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 ATP5HO75947 161 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 DCTDP32321 178 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 GNG3P63215 75 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 IKZF1Q13422 519 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 CDONQ4KMG0 1287 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 ZNF679Q8IYX0 411 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 TMEM86BQ8N661 226 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 SCCPDHQ8NBX0 429 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
CLDN11-204ENST00000477531 MED30Q96HR3 178 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 LYZL4Q96KX0 146 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 CNN2Q99439 309 aaKnown RBP13□□□□□ -0.33
CLDN11-204ENST00000477531 SIRPDQ9H106 197 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 DNTTIP1Q9H147 329 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 PRDM13Q9H4Q3 707 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 TNFRSF19Q9NS68 423 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
CLDN11-204ENST00000477531 IGHV1-69DA0A0B4J2H0 117 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 A0A1B0GVI7 797 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 SLC22A31A6NKX4 558 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 AKR7A2O43488 359 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 MTRF1O75570 445 aaKnown RBP12.99□□□□□ -0.33
CLDN11-204ENST00000477531 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 FASP25445 335 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 GPM6AP51674 278 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 BNIP1Q12981 228 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 FAM76BQ5HYJ3 339 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 ATPAF1Q5TC12 328 aaPredicted RBP12.99□□□□□ -0.33
CLDN11-204ENST00000477531 Q6YL49 198 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
CLDN11-204ENST00000477531 ZDHHC13Q8IUH4 622 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 FAM216BQ8N7L0 139 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 OR5T2Q8NGG2 359 aa12.99□□□□□ -0.33
CLDN11-204ENST00000477531 ZNF671Q8TAW3 534 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms