RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 MED13LQ71F56 2210 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 WNT9BO14905 357 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 GMDSO60547 372 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 MTRF1O75570 445 aaKnown RBP13.41□□□□□ -0.26
COPS3-207ENST00000477299 GRPP07492 148 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 PCMT1P22061 227 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 SOX2P48431 317 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 GABARAPL2P60520 117 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 MRPL28Q13084 256 aaKnown RBP13.41□□□□□ -0.26
COPS3-207ENST00000477299 INSL4Q14641 139 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 ZMAT1Q5H9K5 638 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 FAM201AQ5SY85 155 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 TMEM42Q69YG0 159 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 ASPHD2Q6ICH7 369 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 MOGAT3Q86VF5 341 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 CIARTQ8N365 385 aaPredicted RBP13.41□□□□□ -0.26
COPS3-207ENST00000477299 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 OR5P3Q8WZ94 311 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 CCL17Q92583 94 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 RDH5Q92781 318 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 MYCBPQ99417 103 aaPredicted RBP13.41□□□□□ -0.26
COPS3-207ENST00000477299 ACOT13Q9NPJ3 140 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 TRIM36Q9NQ86 728 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 ZNF275Q9NSD4 429 aaPredicted RBP13.41□□□□□ -0.26
COPS3-207ENST00000477299 ENPP5Q9UJA9 477 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 BLOC1S6Q9UL45 172 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 HHLA2Q9UM44 414 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 OTOGQ6ZRI0 2925 aa13.41□□□□□ -0.26
COPS3-207ENST00000477299 IGHV1-69-2A0A0G2JMI3 117 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 TMEM212A6NML5 194 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 ZNF205O95201 554 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 NRASP01111 189 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 HSMCR30P0CW71 290 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 ATP6V1B1P15313 513 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 GNALP38405 381 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 CD200P41217 278 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 ZDHHC23Q8IYP9 409 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 MAPK1IP1LQ8NDC0 245 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 OR13C3Q8NGS6 347 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 NPRL2Q8WTW4 380 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 FAM168AQ92567 244 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 SMIM19Q96E16 107 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 RNF170Q96K19 258 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 OPALINQ96PE5 141 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 DIRC2Q96SL1 478 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 METTL17Q9H7H0 456 aaPredicted RBP13.4□□□□□ -0.26
COPS3-207ENST00000477299 BARX1Q9HBU1 254 aaPredicted RBP13.4□□□□□ -0.26
COPS3-207ENST00000477299 MPC1Q9Y5U8 109 aa13.4□□□□□ -0.26
COPS3-207ENST00000477299 ARHGAP32A7KAX9 2087 aa13.4□□□□□ -0.27
COPS3-207ENST00000477299 IGKV1-9A0A0C4DH69 117 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 A0A1W2PPK0 400 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 ZNF732B4DXR9 585 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 PLPP2O43688 288 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 CYB5R3P00387 301 aaPredicted RBP13.39□□□□□ -0.27
COPS3-207ENST00000477299 ERCC1P07992 297 aaPredicted RBP13.39□□□□□ -0.27
COPS3-207ENST00000477299 TNFSF4P23510 183 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 SRP9P49458 86 aaKnown RBP13.39□□□□□ -0.27
COPS3-207ENST00000477299 GPM6AP51674 278 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 CHN2P52757 468 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 ACSM1Q08AH1 577 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 RIN1Q13671 783 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 CLVS2Q5SYC1 327 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 AVPI1Q5T686 147 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 LIPKQ5VXJ0 399 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 SHEQ5VZ18 495 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 PLCXD3Q63HM9 321 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 PRSS57Q6UWY2 283 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 C19orf18Q8NEA5 215 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 OR8S1Q8NH09 359 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 TRMT10AQ8TBZ6 339 aaKnown RBP13.39□□□□□ -0.27
COPS3-207ENST00000477299 RPL3LQ92901 407 aaKnown RBP13.39□□□□□ -0.27
COPS3-207ENST00000477299 EGLN1Q9GZT9 426 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 SLC22A4Q9H015 551 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 COMMD4Q9H0A8 199 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 PPP1R3CQ9UQK1 317 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 LRCH1Q9Y2L9 728 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 ZNF281Q9Y2X9 895 aa13.39□□□□□ -0.27
COPS3-207ENST00000477299 IGKV1-27A0A075B6S5 117 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 VWC2LB2RUY7 222 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 RNF223E7ERA6 249 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 INMTO95050 263 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 PTBP3O95758 552 aaKnown RBP13.38□□□□□ -0.27
COPS3-207ENST00000477299 PDLIM4P50479 330 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 TBCEQ15813 527 aaPredicted RBP13.38□□□□□ -0.27
COPS3-207ENST00000477299 ZBTB37Q5TC79 503 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 ZNF773Q6PK81 442 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 OR1M1Q8NGA1 313 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
COPS3-207ENST00000477299 MGLLQ99685 303 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 NKX3-1Q99801 234 aaPredicted RBP13.38□□□□□ -0.27
COPS3-207ENST00000477299 C1orf123Q9NWV4 160 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 ABCA2Q9BZC7 2435 aa13.38□□□□□ -0.27
COPS3-207ENST00000477299 ACANP16112 2415 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 A0A096LNT2 108 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 TRBV5-5A0A0J9YX44 114 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 DHRS7CA6NNS2 312 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 CDIPTO14735 213 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 PIN1P1O15428 100 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 TNFRSF1AP19438 455 aa13.37□□□□□ -0.27
COPS3-207ENST00000477299 GATA4P43694 442 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms