RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CSF2RBP32927 897 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 BSGP35613 385 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 DMRTC1Q5HYR2 192 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 DNLZQ5SXM8 178 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SPRED1Q7Z699 444 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 C10orf126Q8N4M7 172 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 C7orf43Q8WVR3 580 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 MED19A0JLT2 244 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF487B1APH4 448 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 C9orf172C9J069 976 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SMAD6O43541 496 aaKnown RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SNHG28P0DPA3 235 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 NID1P14543 1247 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SDHAP31040 664 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 FGF8P55075 233 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 IHHQ14623 411 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SHHQ15465 462 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 TNXAQ16473 311 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CLLU1Q5K131 121 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 NPWQ8N729 165 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 BCL7CQ8WUZ0 217 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 EDARADDQ8WWZ3 215 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SFRP2Q96HF1 295 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 MYOZ1Q9NP98 299 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SLC45A2Q9UMX9 530 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SLC22A20A6NK97 555 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 M0R082 166 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 MFNGO00587 321 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 MT-ATP6P00846 226 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 MMP11P24347 488 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 THBS4P35443 961 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 DDOSTP39656 456 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 FOXC1Q12948 553 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 HERPUD1Q15011 391 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CD226Q15762 336 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 RBM45Q8IUH3 476 aaKnown RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 D2HGDHQ8N465 521 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 BVESQ8NE79 360 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF296Q8WUU4 475 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 FAM210BQ96KR6 192 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ZDHHC5Q9C0B5 715 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SEBOXQ9HB31 216 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 GPR84Q9NQS5 396 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CLEC2DQ9UHP7 191 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 PSORS1C1Q9UIG5 152 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CHST2Q9Y4C5 530 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CORTO00230 105 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF737O75373 536 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CA2P00918 260 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 KRASP01116 189 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 WNT5AP41221 380 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 APOBEC1P41238 236 aaKnown RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 MIDNQ504T8 468 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 SLC39A5Q6ZMH5 540 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 LYG1Q8N1E2 194 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 SLC39A11Q8N1S5 342 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 BEND2Q8NDZ0 799 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 OR5M9Q8NGP3 310 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 OR13F1Q8NGS4 319 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 NRG4Q8WWG1 115 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 KISS1RQ969F8 398 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CLDN23Q96B33 292 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 PRDM14Q9GZV8 571 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 GMPR2Q9P2T1 348 aaKnown RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 VSIG4Q9Y279 399 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 KDM3BQ7LBC6 1761 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CDRT15L2A8MXV6 281 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 PPP1R17O96001 155 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 IVDP26440 423 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 LGALS7P47929 136 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CLDN18P56856 261 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 SNRPEP62304 92 aaKnown RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 SOX4Q06945 474 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 KCNAB1Q14722 419 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM241Q24JQ0 296 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 HLA-DRB5Q30154 266 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 SLC25A26Q70HW3 274 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 OR52B4Q8NGK2 314 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CHST8Q9H2A9 424 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 SIRT5Q9NXA8 310 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 FIGNL2A6NMB9 653 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CD14P08571 375 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 OR4E1P0C645 316 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CEACAM6P40199 344 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CLDN15P56746 228 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 OTPQ5XKR4 325 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 PDPNQ86YL7 162 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CALHM1Q8IU99 346 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 ANKLE1Q8NAG6 615 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 OR13C6PQ8NH95 151 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 LRRC15Q8TF66 581 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 EGLN2Q96KS0 407 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 Q96M85 177 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 GPR137Q96N19 417 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 PCYT2Q99447 389 aa6.23□□□□□ -1.41
BRCA1-210ENST00000471181 CDCA3Q99618 268 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-210ENST00000471181 GPR87Q9BY21 358 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms