RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 KAAG1Q9UBP8 84 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 DNAJB11Q9UBS4 358 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 LRP12Q9Y561 859 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 MPC1Q9Y5U8 109 aa18.02■□□□□ 0.48
TTC28-204ENST00000468807 PSMD9O00233 223 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 MRPL3P09001 348 aaKnown RBP18.01■□□□□ 0.47
TTC28-204ENST00000468807 PDCD1Q15116 288 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 SNAPC1Q16533 368 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 SLC36A1Q7Z2H8 476 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 COMMD2Q86X83 199 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 SCCPDHQ8NBX0 429 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 OR5T2Q8NGG2 359 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 OR8B12Q8NGG6 310 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 RPL3LQ92901 407 aaKnown RBP18.01■□□□□ 0.47
TTC28-204ENST00000468807 LYZL4Q96KX0 146 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 PKP2Q99959 881 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 CNTD2Q9H8S5 307 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 NOX4Q9NPH5 578 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 SNTG1Q9NSN8 517 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 RPUSD1Q9UJJ7 312 aaKnown RBP18.01■□□□□ 0.47
TTC28-204ENST00000468807 POMPQ9Y244 141 aa18.01■□□□□ 0.47
TTC28-204ENST00000468807 FAM181BA6NEQ2 426 aa18■□□□□ 0.47
TTC28-204ENST00000468807 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18■□□□□ 0.47
TTC28-204ENST00000468807 NDUFB3O43676 98 aa18■□□□□ 0.47
TTC28-204ENST00000468807 CRYBA1P05813 215 aa18■□□□□ 0.47
TTC28-204ENST00000468807 MDKP21741 143 aaPredicted RBP18■□□□□ 0.47
TTC28-204ENST00000468807 FIP1L1Q6UN15 594 aaKnown RBP18■□□□□ 0.47
TTC28-204ENST00000468807 Q6YL49 198 aa18■□□□□ 0.47
TTC28-204ENST00000468807 ZDHHC23Q8IYP9 409 aa18■□□□□ 0.47
TTC28-204ENST00000468807 OR5P3Q8WZ94 311 aa18■□□□□ 0.47
TTC28-204ENST00000468807 RNF170Q96K19 258 aa18■□□□□ 0.47
TTC28-204ENST00000468807 HIST1H2AAQ96QV6 131 aa18■□□□□ 0.47
TTC28-204ENST00000468807 TTTY10Q9BZA0 68 aa18■□□□□ 0.47
TTC28-204ENST00000468807 SIRPDQ9H106 197 aa18■□□□□ 0.47
TTC28-204ENST00000468807 NIPAL2Q9H841 368 aa18■□□□□ 0.47
TTC28-204ENST00000468807 SLC25A19Q9HC21 320 aa18■□□□□ 0.47
TTC28-204ENST00000468807 ABCB9Q9NP78 766 aa18■□□□□ 0.47
TTC28-204ENST00000468807 PAPOLBQ9NRJ5 636 aaKnown RBP18■□□□□ 0.47
TTC28-204ENST00000468807 ACOXLQ9NUZ1 547 aa18■□□□□ 0.47
TTC28-204ENST00000468807 IGHV1-69DA0A0B4J2H0 117 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 TCRBV3S1A0A5B6 114 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 TMEM210A6NLX4 147 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 DYNC1I1O14576 645 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 DNAJC8O75937 253 aaPredicted RBP17.99■□□□□ 0.47
TTC28-204ENST00000468807 CST4P01036 141 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 IGHV1-69P01742 117 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 ALOX5APP20292 161 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 SLC2A5P22732 501 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 KCTD18Q6PI47 426 aaPredicted RBP17.99■□□□□ 0.47
TTC28-204ENST00000468807 FAM71F1Q96KD3 344 aaPredicted RBP17.99■□□□□ 0.47
TTC28-204ENST00000468807 TLNRD1Q9H1K6 362 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 WDR13Q9H1Z4 485 aa17.99■□□□□ 0.47
TTC28-204ENST00000468807 NKX6-3A6NJ46 265 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 AKR7A2O43488 359 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 MELTFP08582 738 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 CRISP1P54107 249 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 CDONQ4KMG0 1287 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 LRRC10Q5BKY1 277 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 LCN1P1Q5VSP4 162 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 VMO1Q7Z5L0 202 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 H1FXQ92522 213 aaKnown RBP17.98■□□□□ 0.47
TTC28-204ENST00000468807 C12orf43Q96C57 262 aaKnown RBP17.98■□□□□ 0.47
TTC28-204ENST00000468807 SLC7A6OSQ96CW6 309 aaPredicted RBP17.98■□□□□ 0.47
TTC28-204ENST00000468807 MROQ9BYG7 248 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 CHIAQ9BZP6 476 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 YIPF3Q9GZM5 350 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 PRDM13Q9H4Q3 707 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 HAO2Q9NYQ3 351 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 ZNF391Q9UJN7 358 aa17.98■□□□□ 0.47
TTC28-204ENST00000468807 TMEM269A0A1B0GVZ9 245 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 POM121CA8CG34 1229 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 TFF1P04155 84 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 SELLP14151 372 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 GPM6AP51674 278 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 C11orf91Q3C1V1 193 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 CEP78Q5JTW2 689 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 STUMQ69YW2 141 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 PAPD5Q8NDF8 572 aaKnown RBP17.97■□□□□ 0.47
TTC28-204ENST00000468807 HPSE2Q8WWQ2 592 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 DNAJC9Q8WXX5 260 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 TEAD3Q99594 435 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 KPTNQ9Y664 436 aa17.97■□□□□ 0.47
TTC28-204ENST00000468807 A0A0U1RQK1 487 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 ZNF816-ZNF321PA0A0X1KG74 233 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 MAP2K3P46734 347 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 PRB3Q04118 309 aaPredicted RBP17.96■□□□□ 0.47
TTC28-204ENST00000468807 THAP5Q7Z6K1 395 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 CMTM4Q8IZR5 234 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 OR10Z1Q8NGY1 313 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 SSMEM1Q8WWF3 244 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 RAB3IPQ96QF0 476 aaPredicted RBP17.96■□□□□ 0.47
TTC28-204ENST00000468807 FGF23Q9GZV9 251 aaPredicted RBP17.96■□□□□ 0.47
TTC28-204ENST00000468807 SIRT7Q9NRC8 400 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 IKZF2Q9UKS7 526 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 GTF2A1LQ9UNN4 478 aa17.96■□□□□ 0.47
TTC28-204ENST00000468807 A0A1B0GVI7 797 aa17.95■□□□□ 0.46
TTC28-204ENST00000468807 CCDC182A6NF36 153 aa17.95■□□□□ 0.46
TTC28-204ENST00000468807 AMY2BP19961 511 aa17.95■□□□□ 0.46
TTC28-204ENST00000468807 DAPP51397 102 aa17.95■□□□□ 0.46
TTC28-204ENST00000468807 RAG2P55895 527 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms