RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 OTOSQ8NHW6 89 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 PIGCQ92535 297 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 RPL3LQ92901 407 aaKnown RBP17.17■□□□□ 0.34
CSPG5-204ENST00000465441 C12orf43Q96C57 262 aaKnown RBP17.17■□□□□ 0.34
CSPG5-204ENST00000465441 CLPTM1LQ96KA5 538 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 LRGUKQ96M69 825 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 RGCCQ9H4X1 137 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 SNTG1Q9NSN8 517 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 HAO2Q9NYQ3 351 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 ONECUT1Q9UBC0 465 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 PRPF19Q9UMS4 504 aaKnown RBP17.17■□□□□ 0.34
CSPG5-204ENST00000465441 MPC1Q9Y5U8 109 aa17.17■□□□□ 0.34
CSPG5-204ENST00000465441 PKD1L1Q8TDX9 2849 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 A0A1B0GVI7 797 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 PRR23D1E9PI22 279 aaPredicted RBP17.16■□□□□ 0.34
CSPG5-204ENST00000465441 GPR37O15354 613 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 GPR137BO60478 399 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 PRR23D2P0DMB1 279 aaPredicted RBP17.16■□□□□ 0.34
CSPG5-204ENST00000465441 PAICSP22234 425 aaKnown RBP17.16■□□□□ 0.34
CSPG5-204ENST00000465441 CALB2P22676 271 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 ACKR3P25106 362 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 GMFBP60983 142 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 RPL15P61313 204 aaKnown RBP17.16■□□□□ 0.34
CSPG5-204ENST00000465441 DEFA6Q01524 100 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 PRDX4Q13162 271 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 LDLRAD3Q86YD5 345 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 ADGRG5Q8IZF4 528 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 OR10Z1Q8NGY1 313 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 OR5P3Q8WZ94 311 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 ASB9Q96DX5 294 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 LYZL4Q96KX0 146 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 DMRTB1Q96MA1 342 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 CITED1Q99966 193 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 DCTN5Q9BTE1 182 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 RTL8AQ9BWD3 113 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 FGF23Q9GZV9 251 aaPredicted RBP17.16■□□□□ 0.34
CSPG5-204ENST00000465441 WDR13Q9H1Z4 485 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 TAS2R1Q9NYW7 299 aa17.16■□□□□ 0.34
CSPG5-204ENST00000465441 ARRDC5A6NEK1 342 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 CST4P01036 141 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 SELLP14151 372 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 PRB3Q04118 309 aaPredicted RBP17.15■□□□□ 0.34
CSPG5-204ENST00000465441 FAM76BQ5HYJ3 339 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 STUMQ69YW2 141 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 FTMTQ8N4E7 242 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 ZNF454Q8N9F8 522 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 LINC01006Q8NI28 216 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 RNF170Q96K19 258 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 SIRT7Q9NRC8 400 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 DNAJB11Q9UBS4 358 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 RNF114Q9Y508 228 aa17.15■□□□□ 0.34
CSPG5-204ENST00000465441 TMEM210A6NLX4 147 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 GNGT2O14610 69 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 AKR7A2O43488 359 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 TFF1P04155 84 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 HMGN1P05114 100 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 DLX1P56177 255 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 CDK5Q00535 292 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 LRRC10Q5BKY1 277 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 BRICD5Q6PL45 260 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 METAP1DQ6UB28 335 aaPredicted RBP17.14■□□□□ 0.33
CSPG5-204ENST00000465441 KCTD8Q6ZWB6 473 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 CPOQ8IVL8 374 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 Q8N7P7 452 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 CANT1Q8WVQ1 401 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 CCDC124Q96CT7 223 aaKnown RBP17.14■□□□□ 0.33
CSPG5-204ENST00000465441 RAB3IPQ96QF0 476 aaPredicted RBP17.14■□□□□ 0.33
CSPG5-204ENST00000465441 PKP2Q99959 881 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 SEMA6AQ9H2E6 1030 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 DPAGT1Q9H3H5 408 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 ZNF391Q9UJN7 358 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 KLHDC2Q9Y2U9 406 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 FAM96BQ9Y3D0 163 aa17.14■□□□□ 0.33
CSPG5-204ENST00000465441 OSMP13725 252 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 HCCSP53701 268 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 OCLNQ16625 522 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 ZNF788Q6ZQV5 615 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 CMTM4Q8IZR5 234 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 HS3ST5Q8IZT8 346 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 OR8B12Q8NGG6 310 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 NPRL2Q8WTW4 380 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 HPSE2Q8WWQ2 592 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 H1FXQ92522 213 aaKnown RBP17.13■□□□□ 0.33
CSPG5-204ENST00000465441 THTPAQ9BU02 230 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 DNTTIP1Q9H147 329 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 ABCB9Q9NP78 766 aa17.13■□□□□ 0.33
CSPG5-204ENST00000465441 A0A1W2PRD5 423 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 A0A1W2PRF3 423 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 A0A1W2PRM7 423 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 RNASEK-C17orf49H0YIS7 233 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 PRODHO43272 600 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 ALOX5APP20292 161 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 PRKACGP22612 351 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 DCTDP32321 178 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 TAF9Q16594 264 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 DGUOKQ16854 277 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 PDLIM3Q53GG5 364 aaPredicted RBP17.12■□□□□ 0.33
CSPG5-204ENST00000465441 BBS1Q8NFJ9 593 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 ANGPTL6Q8NI99 470 aa17.12■□□□□ 0.33
CSPG5-204ENST00000465441 C8orf46Q8TAG6 207 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms