RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 C17orf50Q8WW18 174 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 TMEM239Q8WW34 195 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 CREB3L1Q96BA8 519 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 SEH1LQ96EE3 360 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 GALNT14Q96FL9 552 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 MAGEB18Q96M61 343 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 CATSPER2Q96P56 530 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 NECAP2Q9NVZ3 263 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 ENPP5Q9UJA9 477 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 CES1P1Q9UKY3 287 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 UTP11Q9Y3A2 253 aaKnown RBP4.11□□□□□ -1.75
COPS3-205ENST00000463097 SIGLEC1Q9BZZ2 1709 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 PEAK1Q9H792 1746 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 NFASCO94856 1347 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 KDM3BQ7LBC6 1761 aa4.11□□□□□ -1.75
COPS3-205ENST00000463097 NWD1Q149M9 1564 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 RIMBP3CA6NJZ7 1639 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 RIMBP3BA6NNM3 1639 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 RIMBP3Q9UFD9 1639 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CAMTA1Q9Y6Y1 1673 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 C4AP0C0L4 1744 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 C4BP0C0L5 1744 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CASZ1Q86V15 1759 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 PVALEFA0A1B0GWK0 134 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 SEC14L6B5MCN3 397 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 H7C417 338 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 ALOX12BO75342 701 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 NDUFS6O75380 124 aaKnown RBP4.1□□□□□ -1.75
COPS3-205ENST00000463097 RETP07949 1114 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CD37P11049 281 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CRISP2P16562 243 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 ARL2P36404 184 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CEACAM6P40199 344 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 HTR2BP41595 481 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CDKN2BP42772 138 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 DNASE1L1P49184 302 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 ZNF138P52744 262 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 NUP107P57740 925 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 PPP1CBP62140 327 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 RPL31P62899 125 aaKnown RBP4.1□□□□□ -1.75
COPS3-205ENST00000463097 SLC7A9P82251 487 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 ST3GAL4Q11206 333 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 SMARCB1Q12824 385 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 DGCR6Q14129 220 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 LIN52Q52LA3 116 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 FAHD1Q6P587 224 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 IL34Q6ZMJ4 242 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 TRMT10CQ7L0Y3 403 aaKnown RBP4.1□□□□□ -1.75
COPS3-205ENST00000463097 ZNF485Q8NCK3 441 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 DYDC1Q8WWB3 177 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 SLC35B4Q969S0 331 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 DGCR14Q96DF8 476 aaKnown RBP4.1□□□□□ -1.75
COPS3-205ENST00000463097 RNF185Q96GF1 192 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 BTN2A3PQ96KV6 586 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 CYTH2Q99418 400 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 SPZ1Q9BXG8 430 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 YTHDF1Q9BYJ9 559 aaKnown RBP4.1□□□□□ -1.75
COPS3-205ENST00000463097 OR2S2Q9NQN1 319 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 MTFP1Q9UDX5 166 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 PAIP2BQ9ULR5 123 aaKnown RBP4.1□□□□□ -1.75
COPS3-205ENST00000463097 USH1CQ9Y6N9 552 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 C10orf71Q711Q0 1435 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 TOPAZ1Q8N9V7 1692 aa4.1□□□□□ -1.75
COPS3-205ENST00000463097 TRAV8-7A0A075B6U6 113 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 A0A0B4J2E0 115 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 RNASEK-C17orf49H0YIS7 233 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 H7C2Y5 167 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 PHOX2AO14813 284 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 KLRC4O43908 158 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 CDC40O60508 579 aaKnown RBP eCLIP4.09□□□□□ -1.75
COPS3-205ENST00000463097 FADS2O95864 444 aaKnown RBP4.09□□□□□ -1.75
COPS3-205ENST00000463097 FABP3P05413 133 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 ZDHHC11BP0C7U3 371 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 CD1EP15812 388 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 FUT3P21217 361 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 CAV2P51636 162 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 UBE2E1P51965 193 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 HCCSP53701 268 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 OR2B8PP59922 312 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 LYZP61626 148 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 RPS23P62266 143 aaKnown RBP4.09□□□□□ -1.75
COPS3-205ENST00000463097 PRR3P79522 188 aaKnown RBP4.09□□□□□ -1.75
COPS3-205ENST00000463097 CAV1Q03135 178 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 COTL1Q14019 142 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 POU2AF1Q16633 256 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 ZNF630Q2M218 657 aaPredicted RBP4.09□□□□□ -1.75
COPS3-205ENST00000463097 KRTAP27-1Q3LI81 207 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 CCDC14Q49A88 953 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 SLC25A30Q5SVS4 291 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 ZNF544Q6NX49 715 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 COX15Q7KZN9 410 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 CDKL3Q8IVW4 592 aaPredicted RBP4.09□□□□□ -1.75
COPS3-205ENST00000463097 FAM9CQ8IZT9 166 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 SPAG16Q8N0X2 631 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 DAW1Q8N136 415 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 RIBC1Q8N443 379 aaPredicted RBP4.09□□□□□ -1.75
COPS3-205ENST00000463097 CDRT4Q8N9R6 151 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 ERMNQ8TAM6 284 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 UBE2E2Q96LR5 201 aa4.09□□□□□ -1.75
COPS3-205ENST00000463097 TSNAXQ99598 290 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms