RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 FGF23Q9GZV9 251 aaPredicted RBP13.21□□□□□ -0.29
COL7A1-204ENST00000462475 OR10A2Q9H208 303 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 SP140LQ9H930 580 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 TCF7L1Q9HCS4 588 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 CMC2Q9NRP2 79 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 SNTG1Q9NSN8 517 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 ACTR3BQ9P1U1 418 aa13.21□□□□□ -0.29
COL7A1-204ENST00000462475 SAMHD1Q9Y3Z3 626 aaKnown RBP13.21□□□□□ -0.29
COL7A1-204ENST00000462475 SLC22A31A6NKX4 558 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 ANXA2P2A6NMY6 339 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 NPFFO15130 113 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 APOC1P02654 83 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 ACKR3P25106 362 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 MXRA7P84157 204 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 MICAQ29983 383 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 SPATS1Q496A3 300 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 LRRC10Q5BKY1 277 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 ATPAF1Q5TC12 328 aaPredicted RBP13.2□□□□□ -0.3
COL7A1-204ENST00000462475 CPLX4Q7Z7G2 160 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 TIGD4Q8IY51 512 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 CMTM4Q8IZR5 234 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 C8orf46Q8TAG6 207 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 H1FXQ92522 213 aaKnown RBP13.2□□□□□ -0.3
COL7A1-204ENST00000462475 RPL3LQ92901 407 aaKnown RBP13.2□□□□□ -0.3
COL7A1-204ENST00000462475 TNFRSF14Q92956 283 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 OTULINQ96BN8 352 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 GAFA1Q96PS6 74 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 RAB3IPQ96QF0 476 aaPredicted RBP13.2□□□□□ -0.3
COL7A1-204ENST00000462475 NIPSNAP1Q9BPW8 284 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 MICU1Q9BPX6 476 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 C16orf95Q9H693 158 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 HAO2Q9NYQ3 351 aa13.2□□□□□ -0.3
COL7A1-204ENST00000462475 CAB39Q9Y376 341 aaPredicted RBP13.2□□□□□ -0.3
COL7A1-204ENST00000462475 A0A0G2JK05 382 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 BTBD17A6NE02 478 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 ZNF850A8MQ14 1090 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 GPR37O15354 613 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 EEF1B2P24534 225 aaKnown RBP13.19□□□□□ -0.3
COL7A1-204ENST00000462475 IL5RAQ01344 420 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 PRDX4Q13162 271 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 DGUOKQ16854 277 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 OR2T5Q6IEZ7 315 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 OR10Z1Q8NGY1 313 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 OR2T29Q8NH02 315 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 TEX47Q8TBZ9 253 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 NPRL2Q8WTW4 380 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 HPSE2Q8WWQ2 592 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 DMRTB1Q96MA1 342 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 RTL8AQ9BWD3 113 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 MAGIXQ9H6Y5 334 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 REEP1Q9H902 201 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 NDE1Q9NXR1 346 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 ZNF391Q9UJN7 358 aa13.19□□□□□ -0.3
COL7A1-204ENST00000462475 AKR7A2O43488 359 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 TSPAN9O75954 239 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 GLCEO94923 617 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 H2BFMP0C1H6 154 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 SAA4P35542 130 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 EGR3Q06889 387 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 ZNF788Q6ZQV5 615 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 KCTD8Q6ZWB6 473 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 SHFQ7M4L6 423 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 C1QL4Q86Z23 238 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 ANGPTL6Q8NI99 470 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 OR5P3Q8WZ94 311 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 LYZL4Q96KX0 146 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 DNTTIP1Q9H147 329 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 OR51V1Q9H2C8 321 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 SLC25A10Q9UBX3 287 aaPredicted RBP13.18□□□□□ -0.3
COL7A1-204ENST00000462475 MPC1Q9Y5U8 109 aa13.18□□□□□ -0.3
COL7A1-204ENST00000462475 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 MEIOCA2RUB1 952 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 TMEM210A6NLX4 147 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 RRP9O43818 475 aaKnown RBP13.17□□□□□ -0.3
COL7A1-204ENST00000462475 SELENOFO60613 162 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 PAHP00439 452 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 SNCBQ16143 134 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 LCN8Q6JVE9 175 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 OR8B12Q8NGG6 310 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 OTOSQ8NHW6 89 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 FAM110DQ8TAY7 271 aaPredicted RBP13.17□□□□□ -0.3
COL7A1-204ENST00000462475 PIGCQ92535 297 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 RNF170Q96K19 258 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 ELL3Q9HB65 397 aaPredicted RBP13.17□□□□□ -0.3
COL7A1-204ENST00000462475 TAS2R1Q9NYW7 299 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 ARL2BPQ9Y2Y0 163 aa13.17□□□□□ -0.3
COL7A1-204ENST00000462475 H3BN98 237 aa13.16□□□□□ -0.3
COL7A1-204ENST00000462475 SIGLEC5O15389 551 aa13.16□□□□□ -0.3
COL7A1-204ENST00000462475 CST4P01036 141 aa13.16□□□□□ -0.3
COL7A1-204ENST00000462475 LYNP07948 512 aa13.16□□□□□ -0.3
COL7A1-204ENST00000462475 NDUFB7P17568 137 aa13.16□□□□□ -0.3
COL7A1-204ENST00000462475 DCTDP32321 178 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms