RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SLAMF6Q96DU3 332 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 MND1Q9BWT6 205 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 PNRC2Q9NPJ4 139 aaKnown RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 FAM212BQ9NTI7 297 aaPredicted RBP8.99□□□□□ -0.97
USP39-210ENST00000459775 PCNX1Q96RV3 2341 aa8.99□□□□□ -0.97
USP39-210ENST00000459775 INTS1Q8N201 2190 aaKnown RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 TMEM129A0AVI4 362 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 IRGMA1A4Y4 181 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 OR2AT4A6NND4 320 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RPL36A-HNRNPH2H7BZ11 118 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 ABHD16AO95870 558 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 SLC2A1P11166 492 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 HSD11B1P28845 292 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MPGP29372 298 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 BDKRB2P30411 391 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 TGFBR1P36897 503 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 MAGEB1P43366 347 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 UBE2G2P60604 165 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MFGE8Q08431 387 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 FAM27E3Q08E93 113 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 SSX1Q16384 188 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 GPR107Q5VW38 600 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 Q6ZT83 130 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 C22orf34Q6ZV56 151 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 SVOPQ8N4V2 548 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 YIPF7Q8N8F6 280 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RELL2Q8NC24 303 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 OR5D18Q8NGL1 313 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MAFIPQ8WZ33 124 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RPL3LQ92901 407 aaKnown RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 CACNG6Q9BXT2 260 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 VCX2Q9H322 139 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 LRP12Q9Y561 859 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RTTNQ86VV8 2226 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 LGALS8O00214 317 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 HSPA12AO43301 675 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 CD79AP11912 226 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 JUNBP17275 347 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 CELP19835 753 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 CCNOP22674 350 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 PRKXP51817 358 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 PSG4Q00888 419 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RSPO1Q2MKA7 263 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 SLC16A14Q7RTX9 510 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MYPOPQ86VE0 399 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 FOXRED2Q8IWF2 684 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RDH10Q8IZV5 341 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 CENPSQ8N2Z9 138 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 COMMD1Q8N668 190 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 NUDT10Q8NFP7 164 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 OR1K1Q8NGR3 316 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 OR13C5Q8NGS8 318 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 OR2AJ1Q8NGZ0 328 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 OR52N5Q8NH56 324 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 SETD6Q8TBK2 473 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 BCL2L2Q92843 193 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 UFD1Q92890 307 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 DVL3Q92997 716 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 MRGPRFQ96AM1 343 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 OR8B4Q96RC9 309 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 DCLRE1CQ96SD1 692 aaKnown RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 JAM3Q9BX67 310 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 RANBP3Q9H6Z4 567 aaPredicted RBP8.98□□□□□ -0.97
USP39-210ENST00000459775 BABAM2Q9NXR7 383 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MGAT4CQ9UBM8 478 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 SLC22A13Q9Y226 551 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MAB21L2Q9Y586 359 aa8.98□□□□□ -0.97
USP39-210ENST00000459775 MYO7BQ6PIF6 2116 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 ARHGAP21Q5T5U3 1957 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 CIB4A0PJX0 185 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 A6NJ64 397 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 E9PLN8 166 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 HCKP08631 526 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 CELA3BP08861 270 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 HOXD4P09016 255 aaPredicted RBP8.97□□□□□ -0.97
USP39-210ENST00000459775 CALCBP10092 127 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 NR2C1P13056 603 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 CPT2P23786 658 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 TGFBR2P37173 567 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 AP3S2P59780 193 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 ADORA2A-AS1P86434 159 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 RIN1Q13671 783 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 GAMTQ14353 236 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 SYT6Q5T7P8 510 aaPredicted RBP8.97□□□□□ -0.97
USP39-210ENST00000459775 RNLSQ5VYX0 342 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 CYB5R2Q6BCY4 276 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 ZNF433Q8N7K0 673 aaPredicted RBP8.97□□□□□ -0.97
USP39-210ENST00000459775 RNF152Q8N8N0 203 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 TMEM104Q8NE00 496 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 OR13F1Q8NGS4 319 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 RND1Q92730 232 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 SLAMF9Q96A28 289 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 PDCD1LG2Q9BQ51 273 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 VKORC1Q9BQB6 163 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 C1orf198Q9H425 327 aa8.97□□□□□ -0.97
USP39-210ENST00000459775 RNF167Q9H6Y7 350 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms