RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 GATAD2BQ8WXI9 593 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 C12orf43Q96C57 262 aaKnown RBP10.68□□□□□ -0.7
CHD3-206ENST00000452447 HIST1H2AAQ96QV6 131 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 TEAD3Q99594 435 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 CCL13Q99616 98 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 PKP2Q99959 881 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 YIPF3Q9GZM5 350 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 DNAJB11Q9UBS4 358 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 PCDHGB1Q9Y5G3 927 aa10.68□□□□□ -0.7
CHD3-206ENST00000452447 TMEM269A0A1B0GVZ9 245 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 TMEM210A6NLX4 147 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 SRRM5B3KS81 715 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 PSMD9O00233 223 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 GSC2O15499 205 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 HOXA3O43365 443 aaPredicted RBP10.67□□□□□ -0.7
CHD3-206ENST00000452447 MRPL3P09001 348 aaKnown RBP10.67□□□□□ -0.7
CHD3-206ENST00000452447 MMP9P14780 707 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 ACKR3P25106 362 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 GMFBP60983 142 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 ARF6P62330 175 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 PDCD1Q15116 288 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 PTGES3Q15185 160 aaKnown RBP10.67□□□□□ -0.7
CHD3-206ENST00000452447 WDR38Q5JTN6 314 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 RUSC1-AS1Q66K80 236 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 DEGS2Q6QHC5 323 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 COMMD2Q86X83 199 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 OR5P3Q8WZ94 311 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 RNF170Q96K19 258 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 TBX15Q96SF7 602 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 CADM1Q9BY67 442 aaKnown RBP10.67□□□□□ -0.7
CHD3-206ENST00000452447 TLNRD1Q9H1K6 362 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 CNTD2Q9H8S5 307 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 NOX4Q9NPH5 578 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 HAO2Q9NYQ3 351 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 RPUSD1Q9UJJ7 312 aaKnown RBP10.67□□□□□ -0.7
CHD3-206ENST00000452447 TMEM14AQ9Y6G1 99 aa10.67□□□□□ -0.7
CHD3-206ENST00000452447 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 ACOD1A6NK06 481 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 NDUFB3O43676 98 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 CIB2O75838 187 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 MAP2K3P46734 347 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 DAPP51397 102 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 ESRRGP62508 458 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 IL13RA1P78552 427 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 FAHD1Q6P587 224 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 SHISA2Q6UWI4 295 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 C10orf67Q8IYJ2 551 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 ZDHHC23Q8IYP9 409 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 OR5T2Q8NGG2 359 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 OR10Z1Q8NGY1 313 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 OR5K1Q8NHB7 308 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 ASB17Q8WXJ9 295 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 RPL3LQ92901 407 aaKnown RBP10.66□□□□□ -0.7
CHD3-206ENST00000452447 SEH1LQ96EE3 360 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 LYZL4Q96KX0 146 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 PRDM13Q9H4Q3 707 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 TNFRSF19Q9NS68 423 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 KRT84Q9NSB2 600 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 ACOXLQ9NUZ1 547 aa10.66□□□□□ -0.7
CHD3-206ENST00000452447 H2AFY2Q9P0M6 372 aaPredicted RBP10.66□□□□□ -0.7
CHD3-206ENST00000452447 A0A0U1RQV5 110 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 ZNF816-ZNF321PA0A0X1KG74 233 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 G3V2T6 193 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.65□□□□□ -0.7
CHD3-206ENST00000452447 GPR37O15354 613 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 SPRY1O43609 319 aaPredicted RBP10.65□□□□□ -0.7
CHD3-206ENST00000452447 ZNF254O75437 659 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 CRYBA1P05813 215 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 GPM6AP51674 278 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 IKZF1Q13422 519 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 ZNF829Q3KNS6 432 aaPredicted RBP10.65□□□□□ -0.7
CHD3-206ENST00000452447 CDONQ4KMG0 1287 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 LRRC10Q5BKY1 277 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 THAP5Q7Z6K1 395 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 ZNF679Q8IYX0 411 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 SCCPDHQ8NBX0 429 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 LHX4Q969G2 390 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 ITFG2Q969R8 447 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 UTP4Q969X6 686 aaKnown RBP10.65□□□□□ -0.7
CHD3-206ENST00000452447 FAM71F1Q96KD3 344 aaPredicted RBP10.65□□□□□ -0.7
CHD3-206ENST00000452447 CNN2Q99439 309 aaKnown RBP10.65□□□□□ -0.7
CHD3-206ENST00000452447 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 DNTTIP1Q9H147 329 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 ONECUT1Q9UBC0 465 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 IKZF2Q9UKS7 526 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 KPTNQ9Y664 436 aa10.65□□□□□ -0.7
CHD3-206ENST00000452447 IGHV1-69DA0A0B4J2H0 117 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 A0A1B0GW55 424 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 CCDC182A6NF36 153 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 NKX6-3A6NJ46 265 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 POM121CA8CG34 1229 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 AKR7A2O43488 359 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 PRKYO43930 277 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 FCN3O75636 299 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 IGHV1-69P01742 117 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4L2P0CJ85 424 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4L3P0CJ86 424 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms