RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TOX4O94842 621 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 ACKR3P25106 362 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 CFHR2P36980 270 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 MAP2K3P46734 347 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 BPIFB3P59826 476 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 C11orf91Q3C1V1 193 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 ZNF829Q3KNS6 432 aaPredicted RBP12.67□□□□□ -0.38
CHD3-205ENST00000449744 AWAT1Q58HT5 328 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 BTN2A1Q7KYR7 527 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 SLC36A1Q7Z2H8 476 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 THAP5Q7Z6K1 395 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 ZDHHC23Q8IYP9 409 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 OR5P3Q8WZ94 311 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 ST8SIA4Q92187 359 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 OR8B4Q96RC9 309 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 CCL13Q99616 98 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 PKP2Q99959 881 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 TTTY10Q9BZA0 68 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 TLNRD1Q9H1K6 362 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 DNAJB11Q9UBS4 358 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
CHD3-205ENST00000449744 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
CHD3-205ENST00000449744 ZNF816-ZNF321PA0A0X1KG74 233 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 SLC22A31A6NKX4 558 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 SRRM5B3KS81 715 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 RNASE1P07998 156 aaKnown RBP12.66□□□□□ -0.38
CHD3-205ENST00000449744 HKR1P10072 659 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 FCGR1AP12314 374 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 DCTDP32321 178 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 RIDAP52758 137 aaKnown RBP12.66□□□□□ -0.38
CHD3-205ENST00000449744 GMFBP60983 142 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 ACTR3P61158 418 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 SLX4IPQ5VYV7 408 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 MEPCEQ7L2J0 689 aaKnown RBP12.66□□□□□ -0.38
CHD3-205ENST00000449744 AMIGO2Q86SJ2 522 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 ZNF679Q8IYX0 411 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 TCEANCQ8N8B7 351 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 OR10Z1Q8NGY1 313 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 RPL3LQ92901 407 aaKnown RBP12.66□□□□□ -0.38
CHD3-205ENST00000449744 C12orf43Q96C57 262 aaKnown RBP12.66□□□□□ -0.38
CHD3-205ENST00000449744 C1orf147Q96MC9 270 aaPredicted RBP12.66□□□□□ -0.38
CHD3-205ENST00000449744 WDFY2Q96P53 400 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 PBOV1Q9GZY1 135 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 FAM206AQ9NX38 181 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
CHD3-205ENST00000449744 A0A0U1RQV5 110 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 MDFIC2A0A1B0GVS7 189 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 ZAR1LA6NP61 321 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 CLDN34H7C241 214 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 NDUFB3O43676 98 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 CIB2O75838 187 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 SFTPBP07988 381 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 ATP6V1B1P15313 513 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 ARF6P62330 175 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 ROM1Q03395 351 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 PDCD1Q15116 288 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 SLC9A3R2Q15599 337 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 DEFB112Q30KQ8 113 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 NXNL2Q5VZ03 156 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 BCDIN3DQ7Z5W3 292 aaKnown RBP12.65□□□□□ -0.38
CHD3-205ENST00000449744 SCCPDHQ8NBX0 429 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 OR5T2Q8NGG2 359 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 ITFG2Q969R8 447 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 SEH1LQ96EE3 360 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 FAM71F1Q96KD3 344 aaPredicted RBP12.65□□□□□ -0.38
CHD3-205ENST00000449744 TBX15Q96SF7 602 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 MNTQ99583 582 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 CNTD2Q9H8S5 307 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 HAO2Q9NYQ3 351 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 GTF2A1LQ9UNN4 478 aa12.65□□□□□ -0.38
CHD3-205ENST00000449744 NKX6-3A6NJ46 265 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 ZNF670-ZNF695F2Z2N8 137 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.64□□□□□ -0.39
CHD3-205ENST00000449744 M0R129 80 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 AKR7A2O43488 359 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 MTRF1O75570 445 aaKnown RBP12.64□□□□□ -0.39
CHD3-205ENST00000449744 MMP9P14780 707 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 CXCR4P61073 352 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 ELF3P78545 371 aaPredicted RBP12.64□□□□□ -0.39
CHD3-205ENST00000449744 RIPPLY1Q0D2K3 151 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 IKZF1Q13422 519 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 LRRC10Q5BKY1 277 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 C12orf73Q69YU5 71 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 KDM4DQ6B0I6 523 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 ZNF322Q6U7Q0 402 aaPredicted RBP12.64□□□□□ -0.39
CHD3-205ENST00000449744 MOB3CQ70IA8 216 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 GID4Q8IVV7 300 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 FAM216BQ8N7L0 139 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 OR51E1Q8TCB6 317 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 HPSE2Q8WWQ2 592 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 GATAD2BQ8WXI9 593 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 LRTOMTQ8WZ04 291 aa12.64□□□□□ -0.39
CHD3-205ENST00000449744 DUS3LQ96G46 650 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms