RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 MLNRO43193 412 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 SULT1B1O43704 296 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 ALX3O95076 343 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 GABARAPO95166 117 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 NAT2P11245 290 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 IGFBP3P17936 291 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 ATF1P18846 271 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 RAB3AP20336 220 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 CALRP27797 417 aaKnown RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 PPP3R1P63098 170 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 CNN3Q15417 329 aaKnown RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 OR8G1Q15617 311 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 UBE2V2Q15819 145 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 CEP78Q5JTW2 689 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 C11orf71Q6IPW1 123 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 ZNF529Q6P280 563 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 MOB3CQ70IA8 216 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 CLVS1Q8IUQ0 354 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 GTF3AQ92664 365 aaKnown RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 DVL3Q92997 716 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 ITPKCQ96DU7 683 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 CENPOQ9BU64 300 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 ADAT1Q9BUB4 502 aaKnown RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 MS4A5Q9H3V2 200 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 LAMP3Q9UQV4 416 aa12.47□□□□□ -0.41
SHANK2-210ENST00000449116 RAI1Q7Z5J4 1906 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-210ENST00000449116 UTP20O75691 2785 aaKnown RBP12.46□□□□□ -0.41
SHANK2-210ENST00000449116 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-210ENST00000449116 C17orf100A8MU93 164 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 H0YL77 283 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 SPRY3O43610 288 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 CD8AP01732 235 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 OCMP0CE72 109 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-210ENST00000449116 BMP4P12644 408 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 SRMP19623 302 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 PPOXP50336 477 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 ZNF787Q6DD87 383 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 SLC16A12Q6ZSM3 486 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 OR2Z1Q8NG97 314 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 OR10AD1Q8NGE0 317 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 OR8S1Q8NH09 359 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 OR5P3Q8WZ94 311 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 KCTD7Q96MP8 289 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 DIRC2Q96SL1 478 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 MICU1Q9BPX6 476 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 NAA50Q9GZZ1 169 aaKnown RBP12.46□□□□□ -0.41
SHANK2-210ENST00000449116 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 NEK6Q9HC98 313 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 ZDHHC8Q9ULC8 765 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 SLC7A11Q9UPY5 501 aa12.46□□□□□ -0.41
SHANK2-210ENST00000449116 TRAV1-2A0A0B4J238 106 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 IGKV1-9A0A0C4DH69 117 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 IGHV1-46P01743 117 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 ADH4P08319 380 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 PRKACBP22694 351 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 TNFSF4P23510 183 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 MYL9P24844 172 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 AZGP1P25311 298 aaKnown RBP12.45□□□□□ -0.42
SHANK2-210ENST00000449116 BDKRB2P30411 391 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 TMBIM6P55061 237 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 LSM3P62310 102 aaKnown RBP12.45□□□□□ -0.42
SHANK2-210ENST00000449116 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 CTF1Q16619 201 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 CEACAM21Q3KPI0 293 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 OR5A2Q8NGI9 324 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 OR51A2Q8NGJ7 313 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 RAB2BQ8WUD1 216 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 HPSE2Q8WWQ2 592 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 SPSB1Q96BD6 273 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 ELMOD3Q96FG2 381 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 BCL7BQ9BQE9 202 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 RTL8AQ9BWD3 113 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 RNF167Q9H6Y7 350 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 TMEM138Q9NPI0 162 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 SNTG1Q9NSN8 517 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 NKIRAS2Q9NYR9 191 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 PMF1-BGLAPU3KQ54 211 aa12.45□□□□□ -0.42
SHANK2-210ENST00000449116 PTPN13Q12923 2485 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 SMIM31A0A1B0GVY4 71 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 OR5B21A6NL26 309 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 CYSRT1A8MQ03 144 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 F5H5P2 479 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 MAGEB3O15480 346 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
SHANK2-210ENST00000449116 MAS1P04201 325 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-210ENST00000449116 FUT6P51993 359 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 PCGF3Q3KNV8 242 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 DMRTC1Q5HYR2 192 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 FAM209AQ5JX71 171 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 DNAAF1Q8NEP3 725 aa12.44□□□□□ -0.42
SHANK2-210ENST00000449116 ZNF420Q8TAQ5 688 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms