RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ICE1Q9Y2F5 2266 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 UTP20O75691 2785 aaKnown RBP16.7■□□□□ 0.26
SGCE-207ENST00000447873 IGKV1-9A0A0C4DH69 117 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 NCR1O76036 304 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 ALX3O95076 343 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 HCKP08631 526 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 CA6P23280 308 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 PSMD7P51665 324 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 CAV3P56539 151 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 OR10A3P58181 314 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 ADIPOQQ15848 244 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 PLCXD3Q63HM9 321 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 ZDHHC23Q8IYP9 409 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 NKAIN3Q8N8D7 197 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 DNAAF1Q8NEP3 725 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 DYNC2LI1Q8TCX1 351 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 NPRL2Q8WTW4 380 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 SLC25A46Q96AG3 418 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 HIST1H2AAQ96QV6 131 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 PLK3Q9H4B4 646 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 PPP1R3EQ9H7J1 279 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 NEK6Q9HC98 313 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 TMEM100Q9NV29 134 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 CISD1Q9NZ45 108 aaKnown RBP16.7■□□□□ 0.26
SGCE-207ENST00000447873 MPC1Q9Y5U8 109 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 ABCA4P78363 2273 aa16.7■□□□□ 0.26
SGCE-207ENST00000447873 A1L4Q6 167 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 CLDN1O95832 211 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 RORCP51449 518 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 ZNF672Q499Z4 452 aaPredicted RBP16.69■□□□□ 0.26
SGCE-207ENST00000447873 DDI2Q5TDH0 399 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 OR52N4Q8NGI2 321 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 SPSB1Q96BD6 273 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 MYEF2Q9P2K5 600 aaKnown RBP16.69■□□□□ 0.26
SGCE-207ENST00000447873 SLC7A11Q9UPY5 501 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 V9GY05 133 aa16.69■□□□□ 0.26
SGCE-207ENST00000447873 HELZ2Q9BYK8 2649 aaKnown RBP16.69■□□□□ 0.26
SGCE-207ENST00000447873 PLSCR5A0PG75 271 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 A6NNC1 897 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 PRKACBP22694 351 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 AZGP1P25311 298 aaKnown RBP16.68■□□□□ 0.26
SGCE-207ENST00000447873 APOBEC3AP31941 199 aaPredicted RBP16.68■□□□□ 0.26
SGCE-207ENST00000447873 SOX6P35712 828 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 SERPINF1P36955 418 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 HNRNPA0Q13151 305 aaKnown RBP16.68■□□□□ 0.26
SGCE-207ENST00000447873 MOGQ16653 247 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 GLT8D1Q68CQ7 371 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 NR2C2APQ86WQ0 139 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 LILRB1Q8NHL6 650 aaPredicted RBP16.68■□□□□ 0.26
SGCE-207ENST00000447873 TRMT10AQ8TBZ6 339 aaKnown RBP16.68■□□□□ 0.26
SGCE-207ENST00000447873 DVL3Q92997 716 aaPredicted RBP16.68■□□□□ 0.26
SGCE-207ENST00000447873 GFI1Q99684 422 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 SLC22A4Q9H015 551 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 TAAR3PQ9P1P4 343 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 NOTOA8MTQ0 251 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 ALDOBP05062 364 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 CEACAM21Q3KPI0 293 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 CROCCP3Q8IVE0 287 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 JAGN1Q8N5M9 183 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 OR13G1Q8NGZ3 307 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 OR8S1Q8NH09 359 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 DHRS9Q9BPW9 319 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 MSL2Q9HCI7 577 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 ABCB9Q9NP78 766 aa16.68■□□□□ 0.26
SGCE-207ENST00000447873 A0A0G2JK05 382 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 FAM230AA0A1W2PPH8 454 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 ZNF93P35789 620 aaPredicted RBP16.67■□□□□ 0.26
SGCE-207ENST00000447873 FUT6P51993 359 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 DGUOKQ16854 277 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 NKPD1Q17RQ9 610 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 SFXN4Q6P4A7 337 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 OR5P3Q8WZ94 311 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 FOXRED1Q96CU9 486 aaPredicted RBP16.67■□□□□ 0.26
SGCE-207ENST00000447873 ITPKCQ96DU7 683 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 BORCS8Q96FH0 119 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 SPACA5Q96QH8 159 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 ADAT1Q9BUB4 502 aaKnown RBP16.67■□□□□ 0.26
SGCE-207ENST00000447873 PLGRKTQ9HBL7 147 aa16.67■□□□□ 0.26
SGCE-207ENST00000447873 CCDC59Q9P031 241 aaKnown RBP16.67■□□□□ 0.26
SGCE-207ENST00000447873 GOSR1O95249 250 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 PRF1P14222 555 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 EVX1P49640 407 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 MMP15P51511 669 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 MTCP1P56278 107 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 OR8G1Q15617 311 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 OR5A2Q8NGI9 324 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 HPSE2Q8WWQ2 592 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 CPNE2Q96FN4 548 aaPredicted RBP16.66■□□□□ 0.26
SGCE-207ENST00000447873 GPER1Q99527 375 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 BARHL1Q9BZE3 327 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 CYSLTR2Q9NS75 346 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 CGGBP1Q9UFW8 167 aaPredicted RBP16.66■□□□□ 0.26
SGCE-207ENST00000447873 DAPK2Q9UIK4 370 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 PKDREJQ9NTG1 2253 aa16.66■□□□□ 0.26
SGCE-207ENST00000447873 HRNRQ86YZ3 2850 aaPredicted RBP16.65■□□□□ 0.26
SGCE-207ENST00000447873 IFITM5A6NNB3 132 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 RBP2P50120 134 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 ATP1B3P54709 279 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 KISS1Q15726 138 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 IDNKQ5T6J7 187 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms