RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SNTG1Q9NSN8 517 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM38BQ9NVV0 291 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 NUBP2Q9Y5Y2 271 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 DNAJC13O75165 2243 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 IGF2RP11717 2491 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 TMEM212A6NML5 194 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 OR4C45A6NMZ5 311 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 SC5DO75845 299 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 IGHV3-9P01782 118 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 DCTDP32321 178 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 SDC2P34741 201 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 GNG10P50151 68 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 MXD1Q05195 221 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 OPCMLQ14982 345 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 TAF13Q15543 124 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 C10orf91Q5T1B1 145 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 DDI2Q5TDH0 399 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 KLHL24Q6TFL4 600 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 LDLRAD3Q86YD5 345 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 GJC3Q8NFK1 279 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 OR5M9Q8NGP3 310 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 OR13C5Q8NGS8 318 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 GMPPAQ96IJ6 420 aaPredicted RBP7.09□□□□□ -1.27
CCDC39-201ENST00000442201 TRIB1Q96RU8 372 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF71Q9NQZ8 489 aaPredicted RBP7.09□□□□□ -1.27
CCDC39-201ENST00000442201 DLL4Q9NR61 685 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 CLCF1Q9UBD9 225 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 UPB1Q9UBR1 384 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 NCOR2Q9Y618 2525 aa7.09□□□□□ -1.27
CCDC39-201ENST00000442201 AHRRA9YTQ3 701 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 C1QTNF9BB2RNN3 333 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 CASKO14936 926 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 RER1O15258 196 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 PPIHO43447 177 aaKnown RBP7.09□□□□□ -1.28
CCDC39-201ENST00000442201 GATBO75879 557 aaKnown RBP7.09□□□□□ -1.28
CCDC39-201ENST00000442201 ARL6IP5O75915 188 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 LY86O95711 162 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 IGHV2-5P01817 119 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 C1QTNF9P0C862 333 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 ENDOGQ14249 297 aaKnown RBP7.09□□□□□ -1.28
CCDC39-201ENST00000442201 WDR38Q5JTN6 314 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 HAGHLQ6PII5 290 aaPredicted RBP7.09□□□□□ -1.28
CCDC39-201ENST00000442201 METAP1DQ6UB28 335 aaPredicted RBP7.09□□□□□ -1.28
CCDC39-201ENST00000442201 FAM131AQ6UXB0 335 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 LINGO2Q7L985 606 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 LRRC18Q8N456 261 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 OR10S1Q8NGN2 331 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 PPP1R3EQ9H7J1 279 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 NLKQ9UBE8 527 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 FBXL3Q9UKT7 428 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 R4GMQ9 66 aa7.09□□□□□ -1.28
CCDC39-201ENST00000442201 FAM240BA0A1B0GVZ2 78 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM269A0A1B0GVZ9 245 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF587BE7ETH6 402 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 DVL2O14641 736 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 ZNHIT1O43257 154 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 PNPP00491 289 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 FAM87AP0C7U9 286 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 SULT1A3P0DMM9 295 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 SULT1A4P0DMN0 295 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 HSD11B1P28845 292 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 SLC6A1P30531 599 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 AGTR1P30556 359 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 RORCP51449 518 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 RPS11P62280 158 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC39-201ENST00000442201 GK2Q14410 553 aaPredicted RBP7.08□□□□□ -1.28
CCDC39-201ENST00000442201 PLA1AQ53H76 456 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 KRTCAP3Q53RY4 240 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 CYB5R2Q6BCY4 276 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 NUFIP2Q7Z417 695 aaKnown RBP7.08□□□□□ -1.28
CCDC39-201ENST00000442201 PRSS35Q8N3Z0 413 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 DTD1Q8TEA8 209 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 C2CD4CQ8TF44 421 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 PHYHIPQ92561 330 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 EMC9Q9Y3B6 208 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 CACNA1GO43497 2377 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 DMXL2Q8TDJ6 3036 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM210A6NLX4 147 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 FARS2O95363 451 aaKnown RBP7.08□□□□□ -1.28
CCDC39-201ENST00000442201 CST2P09228 141 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 B4GALT1P15291 398 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 DNASE1P24855 282 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 MTNR1BP49286 362 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 MMP16P51512 607 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 RAB5BP61020 215 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 MFGE8Q08431 387 aaPredicted RBP7.08□□□□□ -1.28
CCDC39-201ENST00000442201 FAM27D1Q5T7N8 215 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 UNQ6494/PRO21346Q6UXR6 183 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF813Q6ZN06 617 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 CATSPERDQ86XM0 798 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 GPR148Q8TDV2 347 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 WNT2BQ93097 391 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 RFT1Q96AA3 541 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 SLC25A46Q96AG3 418 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 TMPRSS5Q9H3S3 457 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 SLC22A13Q9Y226 551 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 PTPRQQ9UMZ3 2332 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 MGAQ8IWI9 3026 aa7.08□□□□□ -1.28
CCDC39-201ENST00000442201 ZFHX4Q86UP3 3567 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms