RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 OR51L1Q8NGJ5 315 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MBD3L2Q8NHZ7 208 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 FOXN4Q96NZ1 517 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TSPAN32Q96QS1 320 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TTTY10Q9BZA0 68 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MTFP1Q9UDX5 166 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 OPN4Q9UHM6 478 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ING4Q9UNL4 249 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 FAM215AQ9Y5M1 114 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ETV7Q9Y603 341 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 hCG_1807616A0A1W2PRN6 198 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 XRCC3O43542 346 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 DNPH1O43598 174 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 QDPRP09417 244 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TALDO1P37837 337 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TAS2R20P59543 309 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 RAB1AP62820 205 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MALLQ13021 153 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPL28Q13084 256 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 TBC1D28Q2M2D7 210 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SFRP5Q5T4F7 317 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC51BQ86UW2 128 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SPERTQ8NA61 448 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF519Q8TB69 540 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 SEC22CQ9BRL7 303 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 MYOZ1Q9NP98 299 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 AMDHD2Q9Y303 409 aa6.45□□□□□ -1.38
CDC42BPA-208ENST00000442054 A0A1B0GTI1 187 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 LOC390937A0A1W2PQ73 354 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZSCAN5BA6NJL1 495 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 F5H5K5 113 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC16A7O60669 478 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 KHDRBS3O75525 346 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 PMS2P2O95744 297 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 BGLAPP02818 100 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 AGTR1P30556 359 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 NAA10P41227 235 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 DLX5P56178 289 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 NKX6-1P78426 367 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 FAAP20Q6NZ36 180 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ANKRD16Q6P6B7 361 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF704Q6ZNC4 412 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 KRT74Q7RTS7 529 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ZNF283Q8N7M2 679 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR8H1Q8NGG4 311 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 RAB40AQ8WXH6 277 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 RAB1BQ9H0U4 201 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SLC7A10Q9NS82 523 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 IGSF10Q6WRI0 2623 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 TIMM8AO60220 97 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ECDO95905 644 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 IGHMP01871 453 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 HLA-HP01893 362 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 LCATP04180 440 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SPARCP09486 303 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR8G3PP0DMU2 310 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 HTR5AP47898 357 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 PRKXP51817 358 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 BLVRAP53004 296 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 RIPPLY1Q0D2K3 151 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ALKBH1Q13686 389 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 PCK2Q16822 640 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 Q499Y3 187 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 HES5Q5TA89 166 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 METTL11BQ5VVY1 283 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 DCAF12L2Q5VW00 463 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 GLB1L2Q8IW92 636 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 TIMD4Q96H15 378 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 TSSK2Q96PF2 358 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 FOXB1Q99853 325 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ALG12Q9BV10 488 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRI1Q9BV20 369 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 DPCDQ9BVM2 203 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SF3B5Q9BWJ5 86 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SRXN1Q9BYN0 137 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 V9GY05 133 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ABCA2Q9BZC7 2435 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 LIPT2A6NK58 231 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 DHHO43323 396 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 CTAG2O75638 210 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ITGA5P08648 1049 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ACSM4P0C7M7 580 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ANXA7P20073 488 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 MPZP25189 248 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SDHAP31040 664 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SRP14P37108 136 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 CLDN12P56749 244 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 MRPS10P82664 201 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SCRN3Q0VDG4 424 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 ECH1Q13011 328 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 HLXQ14774 488 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 HIKESHIQ53FT3 197 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 LEG1Q6P5S2 330 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 KCTD20Q7Z5Y7 419 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 OR1S1Q8NH92 325 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 SYNPRQ8TBG9 265 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 RNF138Q8WVD3 245 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 WFIKKN1Q96NZ8 548 aa6.44□□□□□ -1.38
CDC42BPA-208ENST00000442054 EGLN1Q9GZT9 426 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms