RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PSMD7P51665 324 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 UBE2V2Q15819 145 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 ALKBH6Q3KRA9 238 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 TMEM255AQ5JRV8 349 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 MOB3CQ70IA8 216 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 LRP11Q86VZ4 500 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 NEUROG1Q92886 237 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 CPNE2Q96FN4 548 aaPredicted RBP17.7■□□□□ 0.42
CHD3-204ENST00000439235 HIST1H2AAQ96QV6 131 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 CYSLTR2Q9NS75 346 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 TMEM100Q9NV29 134 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 TAAR3PQ9P1P4 343 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 SLC7A11Q9UPY5 501 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 PLSCR5A0PG75 271 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 LILRA1O75019 489 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 HCKP08631 526 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 CA6P23280 308 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 AZGP1P25311 298 aaKnown RBP17.69■□□□□ 0.42
CHD3-204ENST00000439235 SERPINF1P36955 418 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 MXD1Q05195 221 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 NKPD1Q17RQ9 610 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 CEP78Q5JTW2 689 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 OR51A2Q8NGJ7 313 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 LILRB1Q8NHL6 650 aaPredicted RBP17.69■□□□□ 0.42
CHD3-204ENST00000439235 FBXW5Q969U6 566 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 SLC30A2Q9BRI3 323 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 ADAT1Q9BUB4 502 aaKnown RBP17.69■□□□□ 0.42
CHD3-204ENST00000439235 MYEF2Q9P2K5 600 aaKnown RBP17.69■□□□□ 0.42
CHD3-204ENST00000439235 PRR14LQ5THK1 2151 aa17.69■□□□□ 0.42
CHD3-204ENST00000439235 RELNP78509 3460 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 IGKV1-9A0A0C4DH69 117 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.68■□□□□ 0.42
CHD3-204ENST00000439235 TRIM64BA6NI03 449 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 ALDOBP05062 364 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 PRF1P14222 555 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 OR8G1Q15617 311 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 EFNB3Q15768 340 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 DOPEY1Q5JWR5 2465 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 DDI2Q5TDH0 399 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 GLT8D1Q68CQ7 371 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 SP5Q6BEB4 398 aaPredicted RBP17.68■□□□□ 0.42
CHD3-204ENST00000439235 FBXL14Q8N1E6 418 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 DNAAF1Q8NEP3 725 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 OR13G1Q8NGZ3 307 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 OR8S1Q8NH09 359 aa17.68■□□□□ 0.42
CHD3-204ENST00000439235 AK6Q9Y3D8 172 aaKnown RBP17.68■□□□□ 0.42
CHD3-204ENST00000439235 B9A039 149 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 CLEC2LP0C7M8 214 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 ADRA2CP18825 462 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 RPS19P39019 145 aaKnown RBP17.67■□□□□ 0.42
CHD3-204ENST00000439235 FUT6P51993 359 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 MZT1Q08AG7 82 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 CEACAM21Q3KPI0 293 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 LHFPL2Q6ZUX7 228 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 CROCCP3Q8IVE0 287 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 CDH26Q8IXH8 852 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 SPERTQ8NA61 448 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 NPRL2Q8WTW4 380 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 FOXRED1Q96CU9 486 aaPredicted RBP17.67■□□□□ 0.42
CHD3-204ENST00000439235 BORCS8Q96FH0 119 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 MICU1Q9BPX6 476 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 RTL8AQ9BWD3 113 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 TPK1Q9H3S4 243 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 FAIMQ9NVQ4 179 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 V9GY05 133 aa17.67■□□□□ 0.42
CHD3-204ENST00000439235 ANKHD1Q8IWZ3 2542 aaKnown RBP17.66■□□□□ 0.42
CHD3-204ENST00000439235 A0A1B0GWJ7 208 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 OR5B21A6NL26 309 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 NOTOA8MTQ0 251 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 HS3ST1O14792 307 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 SOX6P35712 828 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 MMP15P51511 669 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 JAGN1Q8N5M9 183 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 OR52N4Q8NGI2 321 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 OR5A2Q8NGI9 324 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 TRMT10AQ8TBZ6 339 aaKnown RBP17.66■□□□□ 0.42
CHD3-204ENST00000439235 DYNC2LI1Q8TCX1 351 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 HPSE2Q8WWQ2 592 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 OR5P3Q8WZ94 311 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 SLC25A46Q96AG3 418 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 ITPKCQ96DU7 683 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 DCUN1D5Q9BTE7 237 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 METTL17Q9H7H0 456 aaPredicted RBP17.66■□□□□ 0.42
CHD3-204ENST00000439235 MSL2Q9HCI7 577 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 NKIRAS2Q9NYR9 191 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 CCDC59Q9P031 241 aaKnown RBP17.66■□□□□ 0.42
CHD3-204ENST00000439235 RTTNQ86VV8 2226 aa17.66■□□□□ 0.42
CHD3-204ENST00000439235 FAM230AA0A1W2PPH8 454 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 SMIM30A4D0T7 59 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 FAM221AA4D161 298 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 RANBP1P43487 201 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 RORCP51449 518 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 ZNF81P51508 661 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 ATP1B3P54709 279 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 OR10A3P58181 314 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 HNRNPA0Q13151 305 aaKnown RBP17.65■□□□□ 0.42
CHD3-204ENST00000439235 Q6ZR03 302 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 MUC15Q8N387 334 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 DVL3Q92997 716 aaPredicted RBP17.65■□□□□ 0.42
CHD3-204ENST00000439235 UQCC2Q9BRT2 126 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms