RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SRSF4Q08170 494 aaKnown RBP6.4□□□□□ -1.38
VPS50-203ENST00000436177 TAF9Q16594 264 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 FAM98BQ52LJ0 330 aaKnown RBP6.4□□□□□ -1.38
VPS50-203ENST00000436177 WDR38Q5JTN6 314 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 TEX36Q5VZQ5 186 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 NCR3LG1Q68D85 454 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 CYP2R1Q6VVX0 501 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 SHFQ7M4L6 423 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 COMMD2Q86X83 199 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 TIGD4Q8IY51 512 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 FAM216BQ8N7L0 139 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 OR1M1Q8NGA1 313 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 OR5R1Q8NH85 324 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 NPRL2Q8WTW4 380 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 SPSB4Q96A44 273 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 MED30Q96HR3 178 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 BTBD10Q9BSF8 475 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 TEX12Q9BXU0 123 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 ARMC1Q9NVT9 282 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 IL20Q9NYY1 176 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 KAAG1Q9UBP8 84 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 VPREB3Q9UKI3 123 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 MPC1Q9Y5U8 109 aa6.4□□□□□ -1.38
VPS50-203ENST00000436177 hCG_38984A0A1B0GV85 526 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PRD5 423 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PRF3 423 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PRM7 423 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 MEIOCA2RUB1 952 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 C5orf63A6NC05 138 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 SLC22A31A6NKX4 558 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 TMEM210A6NLX4 147 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 CDIPTO14735 213 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 NPFFO15130 113 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 PAX4O43316 350 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 SNX3O60493 162 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 NDUFB7P17568 137 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 GABRA5P31644 462 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 TGFBR2P37173 567 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 IER3P46695 156 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 CAPZA1P52907 286 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 RPS7P62081 194 aaKnown RBP6.39□□□□□ -1.39
VPS50-203ENST00000436177 FAM3AP98173 230 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 OCLNQ16625 522 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 TEX30Q5JUR7 227 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 OR2T5Q6IEZ7 315 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 WDR82Q6UXN9 313 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 Q6ZTK2 550 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 GALNT4Q8N4A0 578 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 OR8D4Q8NGM9 314 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 OR4C13Q8NGP0 309 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 OR2T29Q8NH02 315 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 LINC01006Q8NI28 216 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 RNF133Q8WVZ7 376 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 LRGUKQ96M69 825 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 DMRTB1Q96MA1 342 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 PKP2Q99959 881 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 RBM4BQ9BQ04 359 aaKnown RBP6.39□□□□□ -1.39
VPS50-203ENST00000436177 ABHD6Q9BV23 337 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 FAM234AQ9H0X4 552 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 DNTTIP1Q9H147 329 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 MUC13Q9H3R2 512 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 MAGIXQ9H6Y5 334 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 METTL8Q9H825 291 aaKnown RBP6.39□□□□□ -1.39
VPS50-203ENST00000436177 ZNF556Q9HAH1 456 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 CMC2Q9NRP2 79 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 HAO2Q9NYQ3 351 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 ACTR3BQ9P1U1 418 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 SLC25A10Q9UBX3 287 aaPredicted RBP6.39□□□□□ -1.39
VPS50-203ENST00000436177 ZNF391Q9UJN7 358 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 ARL2BPQ9Y2Y0 163 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 RHBDD3Q9Y3P4 386 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 U3KQV3 271 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 TRRAPQ9Y4A5 3859 aa6.39□□□□□ -1.39
VPS50-203ENST00000436177 A0A0G2JK05 382 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PPH5 198 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 FAM183AA6NL82 134 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 PRR23D1E9PI22 279 aaPredicted RBP6.38□□□□□ -1.39
VPS50-203ENST00000436177 F8W735 103 aaPredicted RBP6.38□□□□□ -1.39
VPS50-203ENST00000436177 H0YAE9 185 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 GNGT2O14610 69 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 ACOT8O14734 319 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 E2F6O75461 281 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 LHBP01229 141 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 GASTP01350 101 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 LYNP07948 512 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 CSF1P09603 554 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 PRR23D2P0DMB1 279 aaPredicted RBP6.38□□□□□ -1.39
VPS50-203ENST00000436177 CLUP10909 449 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 PSKH1P11801 424 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 ATP6V1B2P21281 511 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 SAA4P35542 130 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OPRL1P41146 370 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 GABRA2P47869 451 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 HMGA2P52926 109 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 PRDX4Q13162 271 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 KLHL12Q53G59 568 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 STUMQ69YW2 141 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 METAP1DQ6UB28 335 aaPredicted RBP6.38□□□□□ -1.39
VPS50-203ENST00000436177 RHOUQ7L0Q8 258 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 WDR86Q86TI4 376 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms