RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 WIPF3A6NGB9 483 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 E9PLN8 166 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 KLRC4-KLRK1H3BQV0 150 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 M0QYG6 137 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 MRPL33O75394 65 aaKnown RBP11.21□□□□□ -0.61
DDX56-204ENST00000431640 CRTAPO75718 401 aaPredicted RBP11.21□□□□□ -0.61
DDX56-204ENST00000431640 IFNA6P05013 189 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 NTF4P34130 210 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 PER3P56645 1201 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 CXADRP78310 365 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 DHODHQ02127 395 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 CEACAM16Q2WEN9 425 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 KRTAP27-1Q3LI81 207 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 LGALSLQ3ZCW2 172 aaPredicted RBP11.21□□□□□ -0.61
DDX56-204ENST00000431640 SLC16A14Q7RTX9 510 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 GALNT16Q8N428 558 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 ZDHHC22Q8N966 263 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 OR2AK2Q8NG84 335 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 TNFAIP8L1Q8WVP5 186 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 HAS2Q92819 552 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 SNAPC3Q92966 411 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 SPSB1Q96BD6 273 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 CHIAQ9BZP6 476 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 CLEC4MQ9H2X3 399 aaPredicted RBP11.21□□□□□ -0.61
DDX56-204ENST00000431640 POFUT1Q9H488 388 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDX56-204ENST00000431640 ZNF224Q9NZL3 707 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
DDX56-204ENST00000431640 NOSIPQ9Y314 301 aaKnown RBP11.21□□□□□ -0.61
DDX56-204ENST00000431640 ATMQ13315 3056 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR14I1A6ND48 311 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 H3BUI4 141 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 F10P00742 488 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 SP1P08047 785 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR4E1P0C645 316 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 FCGR2AP12318 317 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 GNB3P16520 340 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ZNF32P17041 273 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 NAT1P18440 290 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 PRKACBP22694 351 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 LHX2P50458 406 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 GMFBP60983 142 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 RPS27AP62979 156 aaKnown RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 PLGLB1Q02325 96 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 PPA1Q15181 289 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 CNN3Q15417 329 aaKnown RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 UBE2V2Q15819 145 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 HYAL4Q2M3T9 481 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 DEFB109BQ30KR1 87 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 SCGB2B2Q4G0G5 96 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ZNF774Q6NX45 483 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 FAHD2BQ6P2I3 314 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 MUC20Q8N307 709 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 C12orf45Q8N5I9 185 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 UXS1Q8NBZ7 420 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR8H1Q8NGG4 311 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR52B4Q8NGK2 314 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 CMBLQ96DG6 245 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 FAHD2AQ96GK7 314 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 SPACA5Q96QH8 159 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 SLC6A7Q99884 636 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OCSTAMPQ9BR26 566 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 TTTY12Q9BZ98 90 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ELF5Q9UKW6 265 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 MCTS1Q9ULC4 181 aaKnown RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 NCKAP5O14513 1909 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ANKRD11Q6UB99 2663 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 A6NL46 340 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 RPL36A-HNRNPH2H7BZ11 118 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 TSC22D2O75157 780 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 CA11O75493 328 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 LCATP04180 440 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 FCER2P06734 321 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 DBHP09172 617 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 CD46P15529 392 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ZNF708P17019 499 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 CLDN18P56856 261 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 TSPAN5P62079 268 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 PSG4Q00888 419 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 GK2Q14410 553 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 ZBTB37Q5TC79 503 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 FTMTQ8N4E7 242 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 TMEM104Q8NE00 496 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR51T1Q8NGJ9 327 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR4K15Q8NH41 348 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 REEP6Q96HR9 211 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ZNF845Q96IR2 970 aaPredicted RBP11.2□□□□□ -0.62
DDX56-204ENST00000431640 SCGB3A2Q96PL1 93 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 OR2H1Q9GZK4 316 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 SLC23A1Q9UHI7 598 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ATPIF1Q9UII2 106 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
DDX56-204ENST00000431640 KCNK7Q9Y2U2 307 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms