RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CIB4A0PJX0 185 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC22A20A6NK97 555 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 RSPH10B2B2RC85 870 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 H0YC42 278 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 H7C1H1 209 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 J3QKU1 62 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF701M0R085 212 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 DNASE2O00115 360 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 NME4O00746 187 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 SOCS1O15524 211 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 SNAI2O43623 268 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF207O43670 478 aaKnown RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 GCM2O75603 506 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 HLA-DPB1P04440 258 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 HOXC4P09017 264 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 RSPH10BP0C881 870 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PGA4P0DJD7 388 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PGA3P0DJD8 388 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PGA5P0DJD9 388 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PRPS2P11908 318 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 RAB3AP20336 220 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 WARSP23381 471 aaKnown RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 CFHR2P36980 270 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 CEACAM3P40198 252 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 CSNK1A1P48729 337 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PPP1CBP62140 327 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ESRRGP62508 458 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 DEFB103AP81534 67 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 LOXL1Q08397 574 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 CDH17Q12864 832 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 IFT88Q13099 833 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 DNAJC3Q13217 504 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 RCAN2Q14206 197 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM83EQ2M2I3 478 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PLET1Q6UQ28 207 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 NCCRP1Q6ZVX7 275 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 LINC01551Q86U37 167 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 HORMAD1Q86X24 394 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ITFG1Q8TB96 612 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 APH1BQ8WW43 257 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 RGP1Q92546 391 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF75CPQ92670 426 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 CERS2Q96G23 380 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 CEP170P1Q96L14 293 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF285Q96NJ3 590 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF317Q96PQ6 595 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 IFI27L2Q9H2X8 130 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PIGUQ9H490 435 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 FBXO44Q9H4M3 255 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 SYNDIG1Q9H7V2 258 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 PATZ1Q9HBE1 687 aaKnown RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZSWIM8A7E2V4 1837 aa1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 SETXQ7Z333 2677 aaKnown RBP1.94□□□□□ -2.1
HMGB1P27-201ENST00000431429 EP300Q09472 2414 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 GVINP1Q7Z2Y8 2422 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 CHD7Q9P2D1 2997 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 MGAMO43451 1857 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 PLXNA1Q9UIW2 1896 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGLV4-69A0A075B6H9 119 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 A0A0J9YXV3 536 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 A0A0J9YYE9 177 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 A0A1B0GUH1 482 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 PDZK1P1A8MUH7 402 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 SERPINE3A8MV23 424 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 BOLA2-SMG1P6H3BVE0 249 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 XRCC2O43543 280 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 KDELR3O43731 214 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 TRBC1P01850 177 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 EIF4EP06730 217 aaKnown RBP1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ERGP11308 486 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 GABRG2P18507 467 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 TCN2P20062 427 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 PFN2P35080 140 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 BMI1P35226 326 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 SERPINB8P50452 374 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 SYNJ2BPP57105 145 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 TAS2R39P59534 338 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 KRTAP12-2P59991 146 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ERCC8Q13216 396 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 IRF4Q15306 451 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 GABRA6Q16445 453 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ADNP2Q6IQ32 1131 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 C16orf87Q6PH81 154 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ANGPTL8Q6UXH0 198 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ABHD12BQ7Z5M8 362 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM71AQ8IYT1 594 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 SAXO1Q8IYX7 474 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 INO80EQ8NBZ0 244 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR6Q1Q8NGQ2 317 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 C15orf40Q8WUR7 153 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 NTAN1Q96AB6 310 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 BTN2A3PQ96KV6 586 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 BMFQ96LC9 184 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF442Q9H7R0 627 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 C12orf10Q9HB07 376 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 MRM3Q9HC36 420 aaKnown RBP1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC17A7Q9P2U7 560 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF282Q9UDV7 671 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 RAB26Q9ULW5 256 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 TSSC4Q9Y5U2 329 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms