RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ZNF671Q8TAW3 534 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 SLC25A40Q8TBP6 338 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 TRMT10AQ8TBZ6 339 aaKnown RBP15.66■□□□□ 0.1
HMGN1-206ENST00000431390 UBASH3BQ8TF42 649 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 SPSB1Q96BD6 273 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 CEP19Q96LK0 163 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 SORCS2Q96PQ0 1159 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 OR2J1Q9GZK6 312 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 MIXL1Q9H2W2 232 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 HEATR1Q9H583 2144 aaKnown RBP15.66■□□□□ 0.1
HMGN1-206ENST00000431390 LIN7BQ9HAP6 207 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 ABCB9Q9NP78 766 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 ADAM30Q9UKF2 790 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 SPATA2Q9UM82 520 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 SPEF1Q9Y4P9 236 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 APCP25054 2843 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 OTOGQ6ZRI0 2925 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 NKX2-6A6NCS4 301 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 CST4P01036 141 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 NRASP01111 189 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 HCKP08631 526 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 OCMP0CE72 109 aaPredicted RBP15.66■□□□□ 0.1
HMGN1-206ENST00000431390 SELEP16581 610 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 CD40P25942 277 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 ETV6P41212 452 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 RAB11BQ15907 218 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 ALKBH2Q6NS38 261 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 TMEM108Q6UXF1 575 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 LAX1Q8IWV1 398 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 JAGN1Q8N5M9 183 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 MARS2Q96GW9 593 aaKnown RBP15.66■□□□□ 0.1
HMGN1-206ENST00000431390 CMTM3Q96MX0 182 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 CXorf56Q9H5V9 222 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 HMG20AQ9NP66 347 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 NGBQ9NPG2 151 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 GPR173Q9NS66 373 aa15.66■□□□□ 0.1
HMGN1-206ENST00000431390 CLDN25C9JDP6 229 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 PAHP00439 452 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 BMP4P12644 408 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 SNRPBP14678 240 aaKnown RBP15.65■□□□□ 0.1
HMGN1-206ENST00000431390 PRKACBP22694 351 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 PTAFRP25105 342 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 AZGP1P25311 298 aaKnown RBP15.65■□□□□ 0.1
HMGN1-206ENST00000431390 HTR2CP28335 458 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 TNFSF8P32971 234 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 ZNF93P35789 620 aaPredicted RBP15.65■□□□□ 0.1
HMGN1-206ENST00000431390 CAPZA1P52907 286 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 RIPPLY3P57055 190 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 RIN1Q13671 783 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 SPATA46Q5T0L3 261 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 XKRXQ6PP77 449 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 CCDC190Q86UF4 302 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 HAVCR1Q96D42 359 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 CMBLQ96DG6 245 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 WFIKKN1Q96NZ8 548 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 WDR12Q9GZL7 423 aaKnown RBP15.65■□□□□ 0.1
HMGN1-206ENST00000431390 CGGBP1Q9UFW8 167 aaPredicted RBP15.65■□□□□ 0.1
HMGN1-206ENST00000431390 RHBDD3Q9Y3P4 386 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 ETV7Q9Y603 341 aa15.65■□□□□ 0.1
HMGN1-206ENST00000431390 HPGDSO60760 199 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 ERVS71-1P61550 626 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 ZNF846Q147U1 533 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 CDSNQ15517 529 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 WFDC8Q8IUA0 241 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 MFSD4AQ8N468 514 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 ZNF808Q8N4W9 903 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-206ENST00000431390 LGALS14Q8TCE9 139 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 KLF14Q8TD94 323 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-206ENST00000431390 PIGCQ92535 297 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 SLC25A28Q96A46 364 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 CPNE2Q96FN4 548 aaPredicted RBP15.64■□□□□ 0.09
HMGN1-206ENST00000431390 NDRG3Q9UGV2 375 aa15.64■□□□□ 0.09
HMGN1-206ENST00000431390 A0A0B4J203 849 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 ANKRD30BLA7E2S9 258 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 CLDN12P56749 244 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 ZNF45Q02386 682 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 ZNF718Q3SXZ3 478 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 SPANXN2Q5MJ10 180 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 MBNL2Q5VZF2 373 aaKnown RBP15.63■□□□□ 0.09
HMGN1-206ENST00000431390 OR2T2Q6IF00 324 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 LRRC28Q86X40 367 aaPredicted RBP15.63■□□□□ 0.09
HMGN1-206ENST00000431390 SAMD12Q8N8I0 201 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 OR5H6Q8NGV6 325 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 ZC3HAV1LQ96H79 300 aaKnown RBP15.63■□□□□ 0.09
HMGN1-206ENST00000431390 PAPOLGQ9BWT3 736 aaKnown RBP15.63■□□□□ 0.09
HMGN1-206ENST00000431390 CNTD2Q9H8S5 307 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 MRPL15Q9P015 296 aaKnown RBP15.63■□□□□ 0.09
HMGN1-206ENST00000431390 OR5V1Q9UGF6 321 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 SLC7A11Q9UPY5 501 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 MPC1Q9Y5U8 109 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 FBN2P35556 2912 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 C2CD3Q4AC94 2353 aa15.63■□□□□ 0.09
HMGN1-206ENST00000431390 IQCF6A8MYZ5 107 aa15.62■□□□□ 0.09
HMGN1-206ENST00000431390 APOA1P02647 267 aa15.62■□□□□ 0.09
HMGN1-206ENST00000431390 GLRXP35754 106 aa15.62■□□□□ 0.09
HMGN1-206ENST00000431390 RPS23P62266 143 aaKnown RBP15.62■□□□□ 0.09
HMGN1-206ENST00000431390 NKX6-1P78426 367 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-206ENST00000431390 TFF3Q07654 80 aa15.62■□□□□ 0.09
HMGN1-206ENST00000431390 PSG7Q13046 419 aa15.62■□□□□ 0.09
HMGN1-206ENST00000431390 PRDX4Q13162 271 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms