RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 OR2Z1Q8NG97 314 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 DERL3Q96Q80 235 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 NKIRAS2Q9NYR9 191 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
COL11A1-204ENST00000427239 ASH1LQ9NR48 2969 aaKnown RBP13.12□□□□□ -0.31
COL11A1-204ENST00000427239 TRBV5-7A0A0A0MS05 114 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 TRDV1A0A1B0GX56 115 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 H7C417 338 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 OVOL3O00110 214 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 ARL6IP5O75915 188 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 TGFBR2P37173 567 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 CRYBB2P43320 205 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 PRDX4Q13162 271 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 TMEM91Q6ZNR0 172 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 ZDHHC23Q8IYP9 409 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 OR5A2Q8NGI9 324 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 IGFBPL1Q8WX77 278 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 CCL19Q99731 98 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 ADAT1Q9BUB4 502 aaKnown RBP13.12□□□□□ -0.31
COL11A1-204ENST00000427239 RAB1BQ9H0U4 201 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 ZCCHC4Q9H5U6 513 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 IL19Q9UHD0 177 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
COL11A1-204ENST00000427239 GABRPO00591 440 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 SPRY3O43610 288 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 GPX5O75715 221 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 IGHV1-46P01743 117 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 UCHL1P09936 223 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 FGF9P31371 208 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-204ENST00000427239 GDPGP1Q6ZNW5 385 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 CELF2-AS1Q8N7Q2 184 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 YIPF6Q96EC8 236 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 ELMOD3Q96FG2 381 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 VRK1Q99986 396 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-204ENST00000427239 CACNG6Q9BXT2 260 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 C14orf119Q9NWQ9 140 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 FOXJ3Q9UPW0 622 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 SLC7A11Q9UPY5 501 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-204ENST00000427239 SPG11Q96JI7 2443 aa13.11□□□□□ -0.31
COL11A1-204ENST00000427239 MLNRO43193 412 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 CD55P08174 381 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 OCMP0CE72 109 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-204ENST00000427239 KRTAP10-9P60411 292 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 INSL4Q14641 139 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 CNN3Q15417 329 aaKnown RBP13.1□□□□□ -0.31
COL11A1-204ENST00000427239 UBE2V2Q15819 145 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 PLCXD3Q63HM9 321 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 ZNF529Q6P280 563 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 MOB3CQ70IA8 216 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 ZCCHC24Q8N2G6 241 aaKnown RBP13.1□□□□□ -0.31
COL11A1-204ENST00000427239 OR10AD1Q8NGE0 317 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 TMIGD2Q96BF3 282 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 MICU1Q9BPX6 476 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 CXXC4Q9H2H0 198 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 LIME1Q9H400 295 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 NOX4Q9NPH5 578 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 DECR2Q9NUI1 292 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 BAHCC1Q9P281 2608 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 A0A1W2PPK0 400 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 H0YL77 283 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 SULT1B1O43704 296 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 SRMP19623 302 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 FSTP19883 344 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 RAB3AP20336 220 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 PRKACBP22694 351 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 SRP9P49458 86 aaKnown RBP13.1□□□□□ -0.31
COL11A1-204ENST00000427239 FUT6P51993 359 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 PPP3R1P63098 170 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 HSD17B12Q53GQ0 312 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 FAM76BQ5HYJ3 339 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 CEP78Q5JTW2 689 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 DNAAF1Q8NEP3 725 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 GTF3AQ92664 365 aaKnown RBP13.1□□□□□ -0.31
COL11A1-204ENST00000427239 SPSB1Q96BD6 273 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 RNF170Q96K19 258 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 FUNDC2Q9BWH2 189 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 ITPR2Q14571 2701 aa13.1□□□□□ -0.31
COL11A1-204ENST00000427239 OR5B21A6NL26 309 aa13.09□□□□□ -0.31
COL11A1-204ENST00000427239 PIN1P1O15428 100 aa13.09□□□□□ -0.31
COL11A1-204ENST00000427239 MAGEB3O15480 346 aa13.09□□□□□ -0.31
COL11A1-204ENST00000427239 IGFBP3P17936 291 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-204ENST00000427239 ATF1P18846 271 aa13.09□□□□□ -0.31
COL11A1-204ENST00000427239 TNFRSF1AP19438 455 aa13.09□□□□□ -0.31
COL11A1-204ENST00000427239 GADD45AP24522 165 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms