RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SLC34A3Q8N130 599 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 NATD1Q8N6N6 113 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 UBL4BQ8N7F7 174 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 BEST4Q8NFU0 473 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR10G8Q8NGN5 311 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR4C13Q8NGP0 309 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR10R2Q8NGX6 335 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR4C3Q8NH37 302 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 C11orf45Q8TAV5 145 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR51E1Q8TCB6 317 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 NT5CQ8TCD5 201 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 FRAT1Q92837 279 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 FGF11Q92914 225 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 UCN3Q969E3 161 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 TMEM230Q96A57 120 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 UBE2E2Q96LR5 201 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 RARRES2Q99969 163 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 C20orf144Q9BQM9 153 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 YTHDF1Q9BYJ9 559 aaKnown RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 OR11A1Q9GZK7 315 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ACTR6Q9GZN1 396 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 HOXD1Q9GZZ0 328 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 AMBNQ9NP70 447 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 RBM22Q9NW64 420 aaKnown RBP eCLIP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF446Q9NWS9 450 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 TAS2R1Q9NYW7 299 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 DNAJC27Q9NZQ0 273 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ARMCX1Q9P291 453 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 RIMS3Q9UJD0 308 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 MOKQ9UQ07 419 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 TRAPPC4Q9Y296 219 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 MRPS18CQ9Y3D5 142 aaKnown RBP3.01□□□□□ -1.93
SF3B1-205ENST00000424674 HSPB11Q9Y547 144 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 INSL5Q9Y5Q6 135 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 NUBP2Q9Y5Y2 271 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 ERCC6Q03468 1493 aa3.01□□□□□ -1.93
SF3B1-205ENST00000424674 A0A1W2PP64 1363 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 A0A0B4J2A0 478 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 A0A0G2JMP0 313 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 GLTPD2A6NH11 291 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 NCBP2LA6PVI3 153 aaKnown RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF878C9JN71 531 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 F6UB75 175 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 KPNA4O00629 521 aaPredicted RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 TCAPO15273 167 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 SLC31A2O15432 143 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 CHP2O43745 196 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 PTTG1O95997 202 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 IFNA1P01562 189 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 THY1P04216 161 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 SEMG1P04279 462 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 CTSLP07711 333 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 FRMD6-AS1P0C7T7 363 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 C1GALT1C1LP0DN25 315 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 CD1DP15813 335 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 GABRG2P18507 467 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ELK4P28324 431 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 CEACAM8P31997 349 aaPredicted RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 PFN2P35080 140 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 RFX2P48378 723 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 TCTAP57738 103 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 CDC42P60953 191 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ERVK-16P61578 105 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 RBX1P62877 108 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 RPL32P62910 135 aaKnown RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 PSPHP78330 225 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF45Q02386 682 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 FMODQ06828 376 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 SKP2Q13309 424 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 PPP1R1AQ13522 171 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 KCNJ11Q14654 390 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 LRRC75BQ2VPJ9 315 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF57Q68EA5 555 aaPredicted RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 OR2T5Q6IEZ7 315 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 BAIAP2L2Q6UXY1 529 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 C12orf54Q6X4T0 127 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 Q6ZN92 141 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 FAM231DQ6ZW35 169 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 RAB43Q86YS6 212 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 CBR4Q8N4T8 237 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ARIH2OSQ8N7S6 290 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF114Q8NC26 417 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 OR2Z1Q8NG97 314 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 OR4M2Q8NGB6 313 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 OR2T29Q8NH02 315 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 LNX1Q8TBB1 728 aaPredicted RBP3□□□□□ -1.93
SF3B1-205ENST00000424674 MAPK15Q8TD08 544 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 TNFAIP8L1Q8WVP5 186 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ASB17Q8WXJ9 295 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ASB13Q8WXK3 278 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 C11orf40Q8WZ69 217 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 TMEM54Q969K7 222 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 C9orf85Q96MD7 179 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 COL21A1Q96P44 957 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 SIGMAR1Q99720 223 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 MS4A6AQ9H2W1 248 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 TPK1Q9H3S4 243 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 WDR41Q9HAD4 459 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms