RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 LRRC75A-AS1Q8N1F1 130 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 TSEN15Q8WW01 171 aaKnown RBP14.42□□□□□ -0.1
COL7A1-202ENST00000422991 PIGCQ92535 297 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 ITPKCQ96DU7 683 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 PERPQ96FX8 193 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 CHST5Q9GZS9 411 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 IL19Q9UHD0 177 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 DHDHQ9UQ10 334 aa14.42□□□□□ -0.1
COL7A1-202ENST00000422991 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-202ENST00000422991 ANKRD61A6NGH8 418 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 LY6HO94772 140 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 INMTO95050 263 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 HPXP02790 462 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 SMIM18P0DKX4 95 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 ZNF20P17024 532 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 CD200P41217 278 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 TESK1Q15569 626 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 ARMCX4Q5H9R4 360 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 KCTD8Q6ZWB6 473 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 SPERTQ8NA61 448 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 OR8S1Q8NH09 359 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 ITLN1Q8WWA0 313 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 HPSE2Q8WWQ2 592 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 PP6455Q8WZ26 134 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 OR5P3Q8WZ94 311 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 FGGYQ96C11 551 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 MEGF10Q96KG7 1140 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 OR2V2Q96R30 315 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 EGLN1Q9GZT9 426 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 FGF23Q9GZV9 251 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-202ENST00000422991 CXXC4Q9H2H0 198 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 SAP30LQ9HAJ7 183 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 BARX1Q9HBU1 254 aaPredicted RBP14.41□□□□□ -0.1
COL7A1-202ENST00000422991 DECR2Q9NUI1 292 aa14.41□□□□□ -0.1
COL7A1-202ENST00000422991 ANXA2P2A6NMY6 339 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 TPD52L2O43399 206 aaKnown RBP14.4□□□□□ -0.1
COL7A1-202ENST00000422991 PTBP3O95758 552 aaKnown RBP14.4□□□□□ -0.1
COL7A1-202ENST00000422991 F12P00748 615 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-202ENST00000422991 NRASP01111 189 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 OCM2P0CE71 109 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 PSMB9P28065 219 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 SOX2P48431 317 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 SRP9P49458 86 aaKnown RBP14.4□□□□□ -0.1
COL7A1-202ENST00000422991 MAB21L1Q13394 359 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 NEDD8Q15843 81 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 SSX1Q16384 188 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 CEACAM21Q3KPI0 293 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 Q499Y3 187 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 PLCXD3Q63HM9 321 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 UTS2BQ765I0 119 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 PHC2Q8IXK0 858 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 CELF2-AS1Q8N7Q2 184 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 MUL1Q969V5 352 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 TMED9Q9BVK6 235 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 GPR173Q9NS66 373 aa14.4□□□□□ -0.1
COL7A1-202ENST00000422991 GATBO75879 557 aaKnown RBP14.39□□□□□ -0.11
COL7A1-202ENST00000422991 RPS25P62851 125 aaKnown RBP14.39□□□□□ -0.11
COL7A1-202ENST00000422991 MRPS11P82912 194 aaKnown RBP14.39□□□□□ -0.11
COL7A1-202ENST00000422991 MZT1Q08AG7 82 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 CEP78Q5JTW2 689 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 SYT6Q5T7P8 510 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-202ENST00000422991 SPNS3Q6ZMD2 512 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 MOB3CQ70IA8 216 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 WDR86Q86TI4 376 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 MS4A15Q8N5U1 240 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 PARP16Q8N5Y8 322 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 TMEM106AQ96A25 262 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 OR14A2Q96R54 314 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 MICU1Q9BPX6 476 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 RTL8AQ9BWD3 113 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 VCX3AQ9NNX9 186 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 C14orf119Q9NWQ9 140 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 NDUFB11Q9NX14 153 aa14.39□□□□□ -0.11
COL7A1-202ENST00000422991 SF3B6Q9Y3B4 125 aaKnown RBP14.39□□□□□ -0.11
COL7A1-202ENST00000422991 ITPR3Q14573 2671 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 TRBV5-7A0A0A0MS05 114 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 LOC100289279A0A1B0GTE1 492 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 ZNF879B4DU55 563 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 CD2P06729 351 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 DAOP14920 347 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 TNFRSF1AP19438 455 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 THBS2P35442 1172 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 GATA4P43694 442 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 GP2P55259 537 aaKnown RBP14.38□□□□□ -0.11
COL7A1-202ENST00000422991 UBE2V2Q15819 145 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 DMRTC1Q5HYR2 192 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 TECTBQ96PL2 329 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 DERL3Q96Q80 235 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 HIST1H2AAQ96QV6 131 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 FOXC2Q99958 501 aa14.38□□□□□ -0.11
COL7A1-202ENST00000422991 PRRC2AP48634 2157 aaKnown RBP14.38□□□□□ -0.11
COL7A1-202ENST00000422991 DYSFO75923 2080 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 IGHV1-69-2A0A0G2JMI3 117 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 IGHV3-64DA0A0J9YX35 117 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 OR5B21A6NL26 309 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 TMEM210A6NLX4 147 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 SSX4O60224 188 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 SC5DO75845 299 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 SERPINA3P01011 423 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 JUNBP17275 347 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms