RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CDSNQ15517 529 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 CEACAM21Q3KPI0 293 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 FAM76BQ5HYJ3 339 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 NCMAPQ5T1S8 102 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 ACBD4Q8NC06 268 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR56B2PQ8NGI1 322 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR5A2Q8NGI9 324 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR51A2Q8NGJ7 313 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 S100ZQ8WXG8 99 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 SLC25A28Q96A46 364 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 CMBLQ96DG6 245 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR2J1Q9GZK6 312 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 POFUT1Q9H488 388 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 ESRP2Q9H6T0 727 aaKnown RBP12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 PTTG3PQ9NZH4 202 aa12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
SHMT1P1-201ENST00000419974 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 GGT3PA6NGU5 568 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 NCR1O76036 304 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 GOSR1O95249 250 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 UBBP0CG47 229 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 NAT2P11245 290 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 IGFBP2P18065 325 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 PTBP1P26599 531 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 S100A5P33763 92 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 ZNF93P35789 620 aaPredicted RBP12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 CAV3P56539 151 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 HLXQ14774 488 aaPredicted RBP12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 CRIP3Q6Q6R5 217 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 ASCL4Q6XD76 172 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 LHFPL2Q6ZUX7 228 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR52N4Q8NGI2 321 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 TMEM171Q8WVE6 324 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 POM121Q96HA1 1249 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 SMURF1Q9HCE7 757 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 RABL2AQ9UBK7 228 aaPredicted RBP12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 DAPK2Q9UIK4 370 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 RABL2BQ9UNT1 228 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 CENPEQ02224 2701 aa12.22□□□□□ -0.45
SHMT1P1-201ENST00000419974 NOTCH2Q04721 2471 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 A1L4Q6 167 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 TUBAL3A6NHL2 446 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 OR5B21A6NL26 309 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 ANKRD30BLA7E2S9 258 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 LDLRAD4O15165 306 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 APOA1P02647 267 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 FAM157BP0CG42 384 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 AZGP1P25311 298 aaKnown RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 HTR2CP28335 458 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 RBP2P50120 134 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 KISS1Q15726 138 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 BEX5Q5H9J7 111 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 IDNKQ5T6J7 187 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 RGS7BPQ6MZT1 257 aaPredicted RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 METAP1DQ6UB28 335 aaPredicted RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 CCDC190Q86UF4 302 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 ZDHHC23Q8IYP9 409 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 SPERTQ8NA61 448 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 ZSCAN4Q8NAM6 433 aaPredicted RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 ITPKCQ96DU7 683 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 SOSTQ9BQB4 213 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 TMEM204Q9BSN7 226 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 ABCG5Q9H222 651 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 LIN7BQ9HAP6 207 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 AKIP1Q9NQ31 210 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 NPDC1Q9NQX5 325 aaPredicted RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 PURGQ9UJV8 347 aaKnown RBP12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 ADAM30Q9UKF2 790 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 SLC7A11Q9UPY5 501 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 CMAHPQ9Y471 501 aa12.21□□□□□ -0.45
SHMT1P1-201ENST00000419974 RTTNQ86VV8 2226 aa12.21□□□□□ -0.46
SHMT1P1-201ENST00000419974 H3BSH0 61 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 CTDSP2O14595 271 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZG16O60844 167 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 BPNT1O95861 308 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 GCH1P30793 250 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF45Q02386 682 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 RAB11BQ15907 218 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 CDH24Q86UP0 819 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 WFDC8Q8IUA0 241 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 SAXO1Q8IYX7 474 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 RAB40AQ8WXH6 277 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR5P3Q8WZ94 311 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 C6orf62Q9GZU0 229 aaPredicted RBP12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 MIXL1Q9H2W2 232 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 CNTD2Q9H8S5 307 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 RHOFQ9HBH0 211 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 CYSLTR2Q9NS75 346 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 MYO7BQ6PIF6 2116 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
SHMT1P1-201ENST00000419974 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 ITPR2Q14571 2701 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 A0A0A6YYH2 397 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 LOC100289279A0A1B0GTE1 492 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PQLC2LA1A4F0 135 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 A6NIN4 97 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms