RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ACKR3P25106 362 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 ATP1B3P54709 279 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 CCL8P80075 99 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 TESK1Q15569 626 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 SWI5Q1ZZU3 235 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 FAM209AQ5JX71 171 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 SYT6Q5T7P8 510 aaPredicted RBP7.22□□□□□ -1.25
TRIM48-201ENST00000417545 SATL1Q86VE3 508 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 OR11L1Q8NGX0 322 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 NEU4Q8WWR8 484 aaPredicted RBP7.22□□□□□ -1.25
TRIM48-201ENST00000417545 NRGNQ92686 78 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 SLC30A2Q9BRI3 323 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 CHST5Q9GZS9 411 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 ZCCHC4Q9H5U6 513 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 TAS2R4Q9NYW5 299 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 STUB1Q9UNE7 303 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 CADP27708 2225 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 ADGRG4Q8IZF6 3080 aa7.22□□□□□ -1.25
TRIM48-201ENST00000417545 OR5B21A6NL26 309 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 TMEM210A6NLX4 147 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 LRRC30A6NM36 301 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF732B4DXR9 585 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 F5H5P2 479 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 H0YL77 283 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 SULT1B1O43704 296 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 AIREO43918 545 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 IGHV1-46P01743 117 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 JUNBP17275 347 aaPredicted RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 ATF1P18846 271 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 AZGP1P25311 298 aaKnown RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 CALRP27797 417 aaKnown RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 TGFBR2P37173 567 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 MAGEB1P43366 347 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 RPL5P46777 297 aaKnown RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 MMP15P51511 669 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 GPM6AP51674 278 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 GP2P55259 537 aaKnown RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 GNG3P63215 75 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 SSX1Q16384 188 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 CEACAM21Q3KPI0 293 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 C11orf71Q6IPW1 123 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 LHFPL2Q6ZUX7 228 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 CDH24Q86UP0 819 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 PNLDC1Q8NA58 520 aaKnown RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 OR1M1Q8NGA1 313 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 RPS4Y2Q8TD47 263 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 ITLN1Q8WWA0 313 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 RGP1Q92546 391 aaPredicted RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 GTF3AQ92664 365 aaKnown RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 HPS1Q92902 700 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 ADAT3Q96EY9 351 aaPredicted RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 PERPQ96FX8 193 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 LURAP1Q96LR2 239 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 DERL3Q96Q80 235 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 OR2V2Q96R30 315 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 S100A13Q99584 98 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 CHCHD6Q9BRQ6 235 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 FAM192AQ9GZU8 254 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 BARX1Q9HBU1 254 aaPredicted RBP7.21□□□□□ -1.25
TRIM48-201ENST00000417545 NOX4Q9NPH5 578 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 IL19Q9UHD0 177 aa7.21□□□□□ -1.25
TRIM48-201ENST00000417545 LRRK2Q5S007 2527 aa7.21□□□□□ -1.26
TRIM48-201ENST00000417545 RTTNQ86VV8 2226 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 IGHV3-64DA0A0J9YX35 117 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 TRBV5-5A0A0J9YX44 114 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 TRIM64CA6NLI5 447 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 H7C417 338 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PDCD5O14737 125 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 MLNRO43193 412 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 LILRA1O75019 489 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PLATP00750 562 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 CD8AP01732 235 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 MAS1P04201 325 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PRF1P14222 555 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 GADD45AP24522 165 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 BDKRB2P30411 391 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 RBP2P50120 134 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 FUT6P51993 359 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 ATP5J2P56134 94 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 FABP5Q01469 135 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 DOC2BQ14184 412 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 MST1LQ2TV78 715 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 HFEQ30201 348 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 DDI2Q5TDH0 399 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 C22orf42Q6IC83 251 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 Q6ZR03 302 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 UTS2BQ765I0 119 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PEG10Q86TG7 708 aaKnown RBP7.2□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF573Q86YE8 665 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 ZCCHC24Q8N2G6 241 aaKnown RBP7.2□□□□□ -1.26
TRIM48-201ENST00000417545 JAGN1Q8N5M9 183 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PARP16Q8N5Y8 322 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 OR5A2Q8NGI9 324 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PHYHIPQ92561 330 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 SPSB1Q96BD6 273 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 MEGF10Q96KG7 1140 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 SORCS2Q96PQ0 1159 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 LIME1Q9H400 295 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 FN3KRPQ9HA64 309 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms