RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PSKH1P11801 424 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 MUC1P15941 1255 aaPredicted RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 TGM4P49221 684 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 PRKXP51817 358 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 FXYD6P3P58550 94 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 BLCAPP62952 87 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 SLC35A2P78381 396 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 GFOD2Q3B7J2 385 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 KHDC1LQ5JSQ8 128 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 LYPD4Q6UWN0 246 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 OFCC1Q8IZS5 231 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 PLPP7Q8NBV4 271 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 OR1M1Q8NGA1 313 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 OR4K13Q8NH42 304 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 WIPF2Q8TF74 440 aaPredicted RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 DNAJC9Q8WXX5 260 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 ERMAPQ96PL5 475 aaPredicted RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 HOPXQ9BPY8 73 aaPredicted RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 OCSTAMPQ9BR26 566 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 MUC13Q9H3R2 512 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 NRIP3Q9NQ35 241 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 RPRD1BQ9NQG5 326 aaKnown RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 BATF3Q9NR55 127 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 GID8Q9NWU2 228 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 MRPL15Q9P015 296 aaKnown RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 NOP16Q9Y3C1 178 aaKnown RBP7.56□□□□□ -1.2
LINC01238-201ENST00000416204 STARD9Q9P2P6 4700 aa7.56□□□□□ -1.2
LINC01238-201ENST00000416204 ANKRD30BLA7E2S9 258 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 M0R1W7 72 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 FXYD1O00168 92 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 TBX1O43435 398 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 AKR7A2O43488 359 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 PTP4A3O75365 173 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 ZNF682O95780 498 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 NPPAP01160 153 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 IFNA14P01570 189 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 CHRM2P08172 466 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 PYCR1P32322 319 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 IFNA8P32881 189 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 KDELR2P33947 212 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 VDAC2P45880 294 aaPredicted RBP7.55□□□□□ -1.2
LINC01238-201ENST00000416204 GABRA2P47869 451 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 GSK3BP49841 420 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 PSME3P61289 254 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 COL10A1Q03692 680 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 BLMHQ13867 455 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 ANKDD1AQ495B1 522 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 DMRTC1Q5HYR2 192 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 SAMD4BQ5PRF9 694 aaKnown RBP7.55□□□□□ -1.2
LINC01238-201ENST00000416204 GPR139Q6DWJ6 353 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 DNM1P34Q6PK57 102 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 ZNF782Q6ZMW2 699 aaPredicted RBP7.55□□□□□ -1.2
LINC01238-201ENST00000416204 TMPRSS11FQ6ZWK6 438 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 RRM2BQ7LG56 351 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 RNF144BQ7Z419 303 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 ADCK1Q86TW2 530 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 ZNRF1Q8ND25 227 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 TMEM185AQ8NFB2 350 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 OR5AU1Q8NGC0 362 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 C8orf46Q8TAG6 207 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 RPL3LQ92901 407 aaKnown RBP7.55□□□□□ -1.2
LINC01238-201ENST00000416204 SPTSSAQ969W0 71 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 CDRT15Q96T59 188 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 ASCL2Q99929 193 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 COPS4Q9BT78 406 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 NDEL1Q9GZM8 345 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 MEGF9Q9H1U4 602 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 INPP5EQ9NRR6 644 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 C19orf12Q9NSK7 152 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 MRPL22Q9NWU5 206 aaKnown RBP7.55□□□□□ -1.2
LINC01238-201ENST00000416204 HAO2Q9NYQ3 351 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 CYB5R1Q9UHQ9 305 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 SIGLEC7Q9Y286 467 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 U3KQK5 164 aa7.55□□□□□ -1.2
LINC01238-201ENST00000416204 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 UNC119BA6NIH7 251 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 E9PQ18 207 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 MRASO14807 208 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 IFNW1P05000 195 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 HIST1H1CP16403 213 aaKnown RBP7.54□□□□□ -1.2
LINC01238-201ENST00000416204 CRABP1P29762 137 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 GRK5P34947 590 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 CAPZA1P52907 286 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 SELENOWP63302 87 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 CNN3Q15417 329 aaKnown RBP7.54□□□□□ -1.2
LINC01238-201ENST00000416204 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 TCTEX1D4Q5JR98 221 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 FGD3Q5JSP0 725 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 C8orf82Q6P1X6 216 aaPredicted RBP7.54□□□□□ -1.2
LINC01238-201ENST00000416204 Q8N2B8 174 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 FAM156AQ8NDB6 213 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 PAPD5Q8NDF8 572 aaKnown RBP7.54□□□□□ -1.2
LINC01238-201ENST00000416204 SDR9C7Q8NEX9 313 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 OR51L1Q8NGJ5 315 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 ASB9Q96DX5 294 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 CHID1Q9BWS9 393 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
LINC01238-201ENST00000416204 WNT10AQ9GZT5 417 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms