RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 AGAP20933 346 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 IGHV1-2P23083 117 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 MPGP29372 298 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 MRPS34P82930 218 aaKnown RBP8.67□□□□□ -1.02
DDB1-202ENST00000414411 P2RY6Q15077 328 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 PCK2Q16822 640 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 ABHD12BQ7Z5M8 362 aaPredicted RBP8.67□□□□□ -1.02
DDB1-202ENST00000414411 COQ3Q9NZJ6 369 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 ZNF222Q9UK12 451 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 DHDHQ9UQ10 334 aa8.67□□□□□ -1.02
DDB1-202ENST00000414411 WIPF3A6NGB9 483 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 SLC17A2O00624 439 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 XRCC3O43542 346 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 SULT1A3P0DMM9 295 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 SULT1A4P0DMN0 295 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 FSTP19883 344 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 LAP3P28838 519 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 CDAP32320 146 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ARF1P84077 181 aaKnown RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 KCNMB1Q16558 191 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 FBXL19-AS1Q494R0 122 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 NRN1LQ496H8 165 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 SFRP4Q6FHJ7 346 aaPredicted RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 FAM166AQ6J272 317 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ANKRD16Q6P6B7 361 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 LUZP2Q86TE4 346 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 C9orf62Q8N4C0 152 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 OR51D1Q8NGF3 324 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ST7LQ8TDW4 575 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 DEDD2Q8WXF8 326 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 PPP1R14AQ96A00 147 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 NABP1Q96AH0 204 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 TMEM38BQ9NVV0 291 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 HSPB11Q9Y547 144 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 R4GMQ9 66 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 GGT3PA6NGU5 568 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 EEF1E1-BLOC1S5C9J1V9 151 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 PYCARD-AS1I3L0S3 204 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 AKR7A2O43488 359 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 PRAF2O60831 178 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ZG16O60844 167 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 CTAG2O75638 210 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 HRGP04196 525 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 CD2P06729 351 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ZNF823P16415 610 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 DCTDP32321 178 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 POU3F4P49335 361 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ZNF84P51523 738 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 EFNB2P52799 333 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 SNRPD2P62316 118 aaKnown RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDB1-202ENST00000414411 RAB11BQ15907 218 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 FAM27BQ5VT28 67 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 DCXRQ7Z4W1 244 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 BEST4Q8NFU0 473 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ITLN2Q8WWU7 325 aaPredicted RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 BCL2L2Q92843 193 aaPredicted RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 FOXB1Q99853 325 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 NELFAQ9H3P2 528 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 RANBP3Q9H6Z4 567 aaPredicted RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 ELOVL5Q9NYP7 299 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 PTTG3PQ9NZH4 202 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 CKLFQ9UBR5 152 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 FBXL3Q9UKT7 428 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ING4Q9UNL4 249 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 FLVCR2Q9UPI3 526 aa8.66□□□□□ -1.02
DDB1-202ENST00000414411 ANKHD1Q8IWZ3 2542 aaKnown RBP8.66□□□□□ -1.02
DDB1-202ENST00000414411 FASNP49327 2511 aaKnown RBP8.65□□□□□ -1.02
DDB1-202ENST00000414411 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.02
DDB1-202ENST00000414411 MEIKINA0A087WXM9 373 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 LOC100289279A0A1B0GTE1 492 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 A0A1B0GVI7 797 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 HPXP02790 462 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 IGFBP3P17936 291 aaPredicted RBP8.65□□□□□ -1.02
DDB1-202ENST00000414411 VEGFCP49767 419 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 FAM27E3Q08E93 113 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 GABRA6Q16445 453 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 C6orf183Q5T699 404 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 C9orf135Q5VTT2 229 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 DEGS2Q6QHC5 323 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 BIVMQ86UB2 503 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 CXorf67Q86X51 503 aaPredicted RBP8.65□□□□□ -1.02
DDB1-202ENST00000414411 LINC00346Q8IVM7 164 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 ZNF808Q8N4W9 903 aaPredicted RBP8.65□□□□□ -1.02
DDB1-202ENST00000414411 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 DACT3Q96B18 629 aaPredicted RBP8.65□□□□□ -1.02
DDB1-202ENST00000414411 FAM3DQ96BQ1 224 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 SEC61A2Q9H9S3 476 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 BEX1Q9HBH7 125 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 G6PC2Q9NQR9 355 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 SLC17A5Q9NRA2 495 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 HHLA2Q9UM44 414 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 HCFC1P51610 2035 aa8.65□□□□□ -1.02
DDB1-202ENST00000414411 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.03
DDB1-202ENST00000414411 LOC107986453A0A1B0GWG9 222 aa8.64□□□□□ -1.03
DDB1-202ENST00000414411 CIB4A0PJX0 185 aa8.64□□□□□ -1.03
DDB1-202ENST00000414411 H7C417 338 aa8.64□□□□□ -1.03
DDB1-202ENST00000414411 ARPC1BO15143 372 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms