RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TRAV1-2A0A0B4J238 106 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 M0R1B8 84 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 RAB13P51153 203 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 CLDN20P56880 219 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 FXYD6P3P58550 94 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 TAS2R19P59542 299 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 PMP22Q01453 160 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 BAMBIQ13145 260 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ACTBL2Q562R1 376 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 PHYHD1Q5SRE7 291 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 NUFIP2Q7Z417 695 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 NOXA1Q86UR1 476 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 KCNG3Q8TAE7 436 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 DEDD2Q8WXF8 326 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 BTF3L4Q96K17 158 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 GPX7Q96SL4 187 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 RTL8AQ9BWD3 113 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 NOX4Q9NPH5 578 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 PIGLQ9Y2B2 252 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 LRRC30A6NM36 301 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 AQP8O94778 261 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SHC1P29353 583 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 CDAP32320 146 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 LTBQ06643 244 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SLC22A6Q4U2R8 563 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ELP2Q6IA86 826 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 OR2G2Q8NGZ5 317 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 DCLRE1CQ96SD1 692 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 C1QTNF6Q9BXI9 259 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SMIM3Q9BZL3 60 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF701Q9NV72 531 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 MDC1Q14676 2089 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 TGM1P22735 817 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 HTR2CP28335 458 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 RBM39Q14498 530 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF239Q16600 458 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 MESTQ5EB52 335 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 NPEPL1Q8NDH3 523 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF738Q8NE65 137 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 CASTOR1Q8WTX7 329 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ABHD3Q8WU67 409 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF486Q96H40 463 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 GON7Q9BXV9 100 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SLIRPQ9GZT3 109 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 PBOV1Q9GZY1 135 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 MFFQ9GZY8 342 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 OR51J1Q9H342 316 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SLCO1C1Q9NYB5 712 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 A0A1B0GVG6 124 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 BTBD17A6NE02 478 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SRMP19623 302 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF93P35789 620 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 RBMXP38159 391 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 RPS27P42677 84 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 LIMS1P48059 325 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 HCCSP53701 268 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ARF6P62330 175 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 MRPS34P82930 218 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 C3AR1Q16581 482 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 PCGF3Q3KNV8 242 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 TMEM81Q6P7N7 255 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 NRARPQ7Z6K4 114 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 SIGLEC12Q96PQ1 595 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF552Q9H707 407 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF703Q9H7S9 590 aaPredicted RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 GPR84Q9NQS5 396 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 MRPS18AQ9NVS2 196 aaKnown RBP7.56□□□□□ -1.2
SYNE1-211ENST00000413186 GOLT1BQ9Y3E0 138 aa7.56□□□□□ -1.2
SYNE1-211ENST00000413186 IGLV3-32A0A0A0MS00 114 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 NPIPB13A6NJU9 1138 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 OR4C45A6NMZ5 311 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 NPIPB4C9JG80 1138 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 CRHP06850 196 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 CST2P09228 141 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF32P17041 273 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 AMY2BP19961 511 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SULT1A2P50226 295 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 AGFG1P52594 562 aaKnown RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ACSM1Q08AH1 577 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ARL16Q0P5N6 197 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF770Q6IQ21 691 aaPredicted RBP7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TMEM108Q6UXF1 575 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 BAGE2Q86Y30 109 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 AKR7LQ8NHP1 331 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 OR51E1Q8TCB6 317 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TECTBQ96PL2 329 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 DECR2Q9NUI1 292 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 PLEKHJ1Q9NW61 149 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 PCDHB10Q9UN67 800 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 RAXQ9Y2V3 346 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 TMEM8BA6NDV4 472 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 PROB1E7EW31 1015 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 SULT1C2O00338 296 aa7.55□□□□□ -1.2
SYNE1-211ENST00000413186 DIRAS3O95661 229 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms