RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CELF2-AS1Q8N7Q2 184 aa24.86■■□□□ 1.57
USP42-202ENST00000404008 OR8S1Q8NH09 359 aa24.86■■□□□ 1.57
USP42-202ENST00000404008 ANXA2P2A6NMY6 339 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 HSMCR30P0CW71 290 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 TNFRSF1AP19438 455 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 MRPS11P82912 194 aaKnown RBP24.85■■□□□ 1.57
USP42-202ENST00000404008 MLLT11Q13015 90 aaPredicted RBP24.85■■□□□ 1.57
USP42-202ENST00000404008 YIF1BQ5BJH7 314 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 KRTAP1-3Q8IUG1 177 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 ZNF525Q8N782 197 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 GPR148Q8TDV2 347 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 OR5P3Q8WZ94 311 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 FGGYQ96C11 551 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 ADAT3Q96EY9 351 aaPredicted RBP24.85■■□□□ 1.57
USP42-202ENST00000404008 MGLLQ99685 303 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 ZNF696Q9H7X3 374 aa24.85■■□□□ 1.57
USP42-202ENST00000404008 PRRC2AP48634 2157 aaKnown RBP24.85■■□□□ 1.57
USP42-202ENST00000404008 LOC100289279A0A1B0GTE1 492 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 NRASP01111 189 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 CRYBB2P43320 205 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 RPS11P62280 158 aaKnown RBP eCLIP24.84■■□□□ 1.57
USP42-202ENST00000404008 Q5PR19 223 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 UBE2UQ5VVX9 321 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 PRSS57Q6UWY2 283 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 TSEN15Q8WW01 171 aaKnown RBP24.84■■□□□ 1.57
USP42-202ENST00000404008 HPSE2Q8WWQ2 592 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 PP6455Q8WZ26 134 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 RDH5Q92781 318 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 OPALINQ96PE5 141 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 MYOZ1Q9NP98 299 aaPredicted RBP24.84■■□□□ 1.57
USP42-202ENST00000404008 DHDHQ9UQ10 334 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 DYSFO75923 2080 aa24.84■■□□□ 1.57
USP42-202ENST00000404008 IGHV1-69-2A0A0G2JMI3 117 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 ANKRD61A6NGH8 418 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 LYNX1G3V0Z9 82 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 PTBP3O95758 552 aaKnown RBP24.83■■□□□ 1.57
USP42-202ENST00000404008 LYNX1P0DP58 116 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 ZNF20P17024 532 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 COL8A2P25067 703 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 MZT1Q08AG7 82 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 GPR50Q13585 617 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 TPBGQ13641 420 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 CEACAM21Q3KPI0 293 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 CEP78Q5JTW2 689 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 PLCXD3Q63HM9 321 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 DNM1P46Q6ZS02 220 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 OR13C5Q8NGS8 318 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 UFD1Q92890 307 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 YIPF5Q969M3 257 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 NR1H4Q96RI1 486 aaPredicted RBP24.83■■□□□ 1.57
USP42-202ENST00000404008 MICU1Q9BPX6 476 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 CHST5Q9GZS9 411 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 FGF23Q9GZV9 251 aaPredicted RBP24.83■■□□□ 1.57
USP42-202ENST00000404008 GPR173Q9NS66 373 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 C14orf119Q9NWQ9 140 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 ITGB1BP2Q9UKP3 347 aa24.83■■□□□ 1.57
USP42-202ENST00000404008 MYO9AB2RTY4 2548 aa24.83■■□□□ 1.56
USP42-202ENST00000404008 CDC14BO60729 498 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 GATA4P43694 442 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 LIPKQ5VXJ0 399 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 MOB3CQ70IA8 216 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 TSPAN14Q8NG11 270 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 FCGR1BQ92637 280 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 HIST1H2AAQ96QV6 131 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 RTL8AQ9BWD3 113 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 GCM1Q9NP62 436 aa24.82■■□□□ 1.56
USP42-202ENST00000404008 IGHV3-64DA0A0J9YX35 117 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 TRBV5-5A0A0J9YX44 114 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 CPEP16870 476 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 THBS2P35442 1172 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 SHEQ5VZ18 495 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 WDR86Q86TI4 376 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 CACNG2Q9Y698 323 aa24.81■■□□□ 1.56
USP42-202ENST00000404008 RP2O75695 350 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 OCM2P0CE71 109 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 SOX2P48431 317 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 UBE2V2Q15819 145 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 DMRTC1Q5HYR2 192 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 PRAMEF6Q5VXH4 476 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 CLEC2AQ6UVW9 174 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 UTS2BQ765I0 119 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 TGIF2LYQ8IUE0 185 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 PARP16Q8N5Y8 322 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 OR5A2Q8NGI9 324 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 DLL4Q9NR61 685 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 TREM2Q9NZC2 230 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 PPP1R3CQ9UQK1 317 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 GATBO75879 557 aaKnown RBP24.8■■□□□ 1.56
USP42-202ENST00000404008 SERPINA3P01011 423 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 CSF3P09919 207 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 PDLIM4P50479 330 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 MPPED2Q15777 294 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 CLEC12BQ2HXU8 276 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 Q499Y3 187 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 MOGAT3Q86VF5 341 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 TMEM106AQ96A25 262 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 RNF170Q96K19 258 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 TECTBQ96PL2 329 aa24.8■■□□□ 1.56
USP42-202ENST00000404008 A0A087WXM4 84 aa24.79■■□□□ 1.56
USP42-202ENST00000404008 OR5B21A6NL26 309 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms