RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ALDH3B1P43353 468 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 HLXQ14774 488 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-205ENST00000401607 RFPL4BQ6ZWI9 263 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 C1QL2Q7Z5L3 287 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 ACBD4Q8NC06 268 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 TMEM104Q8NE00 496 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 OR56B2PQ8NGI1 322 aa22.13■■□□□ 1.13
CPNE1-205ENST00000401607 WIPF3A6NGB9 483 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 RAB27BO00194 218 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 UBBP0CG47 229 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 RANBP1P43487 201 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 IDH3GP51553 393 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-205ENST00000401607 TBC1D28Q2M2D7 210 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 MRPL21Q7Z2W9 205 aaKnown RBP22.12■■□□□ 1.13
CPNE1-205ENST00000401607 IGKV1-27A0A075B6S5 117 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 FAM240BA0A1B0GVZ2 78 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 A0A1W2PP11 408 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 METTL21EPA6NDL7 271 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 GLI4P10075 376 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 PRKACBP22694 351 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 ZP1P60852 638 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 P2RY6Q15077 328 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 BEND4Q6ZU67 534 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 DOLPP1Q86YN1 238 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 TNFAIP8L1Q8WVP5 186 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 LPAR5Q9H1C0 372 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 TP63Q9H3D4 680 aaPredicted RBP22.12■■□□□ 1.13
CPNE1-205ENST00000401607 ASF1BQ9NVP2 202 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 NLKQ9UBE8 527 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 KCNN3Q9UGI6 736 aa22.12■■□□□ 1.13
CPNE1-205ENST00000401607 SLC6A1P30531 599 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 GUCA2AQ02747 115 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 DYRK1AQ13627 763 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 GFRALQ6UXV0 394 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 KCNG3Q8TAE7 436 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 PIGCQ92535 297 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 CRIM1Q9NZV1 1036 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 MRPL15Q9P015 296 aaKnown RBP22.11■■□□□ 1.13
CPNE1-205ENST00000401607 GHRLQ9UBU3 117 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 ATMQ13315 3056 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 SPTBN4Q9H254 2564 aa22.11■■□□□ 1.13
CPNE1-205ENST00000401607 PRRC2CQ9Y520 2896 aaKnown RBP22.11■■□□□ 1.13
CPNE1-205ENST00000401607 INTS1Q8N201 2190 aaKnown RBP22.11■■□□□ 1.13
CPNE1-205ENST00000401607 FAM230AA0A1W2PPH8 454 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 CDC14BO60729 498 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 SLC34A2O95436 690 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 CBR1P16152 277 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 HOXC12P31275 282 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 MTCP1P56278 107 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 C17orf78Q8N4C9 275 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 OPA3Q9H6K4 179 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 H7C417 338 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 PRRG2O14669 202 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 MPIG6BO95866 241 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 PLA1AQ53H76 456 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 RAB12Q6IQ22 244 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 ZNF474Q6S9Z5 364 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-205ENST00000401607 MOB3CQ70IA8 216 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 BHLHA15Q7RTS1 189 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-205ENST00000401607 CMBLQ96DG6 245 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 C7orf50Q9BRJ6 194 aaKnown RBP22.1■■□□□ 1.13
CPNE1-205ENST00000401607 NICN1Q9BSH3 213 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 SFXN3Q9BWM7 321 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 OR51B6Q9H340 312 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 BANF2Q9H503 90 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 MTFP1Q9UDX5 166 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 ING4Q9UNL4 249 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 ZNF835Q9Y2P0 537 aa22.1■■□□□ 1.13
CPNE1-205ENST00000401607 A0A0A6YYD4 124 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 ANKRD20A5PA0PJZ0 165 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 ICMTO60725 284 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 AGFG2O95081 481 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 IGKV3-15P01624 115 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 PRSS3P35030 304 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 SLC22A6Q4U2R8 563 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 PLCXD3Q63HM9 321 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 LHFPL2Q6ZUX7 228 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 BORCS8Q96FH0 119 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 WBP1Q96G27 269 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 TECTBQ96PL2 329 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 TMEM59Q9BXS4 323 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 NEK6Q9HC98 313 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 GPR160Q9UJ42 338 aa22.09■■□□□ 1.13
CPNE1-205ENST00000401607 ZNF850A8MQ14 1090 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 ECDO95905 644 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-205ENST00000401607 VEGFCP49767 419 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 RBP2P50120 134 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 PLET1Q6UQ28 207 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 GPX8Q8TED1 209 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 UPRTQ96BW1 309 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 RNF170Q96K19 258 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 ZMAT3Q9HA38 289 aaKnown RBP22.08■■□□□ 1.13
CPNE1-205ENST00000401607 CDH20Q9HBT6 801 aa22.08■■□□□ 1.13
CPNE1-205ENST00000401607 ELF5Q9UKW6 265 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-205ENST00000401607 MYO7BQ6PIF6 2116 aa22.08■■□□□ 1.12
CPNE1-205ENST00000401607 CENPXA8MT69 81 aa22.07■■□□□ 1.12
CPNE1-205ENST00000401607 J3QW42 95 aa22.07■■□□□ 1.12
CPNE1-205ENST00000401607 CRTAPO75718 401 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-205ENST00000401607 FUT6P51993 359 aa22.07■■□□□ 1.12
CPNE1-205ENST00000401607 ZNF260Q3ZCT1 412 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms