RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR8G1Q15617 311 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 ZBTB37Q5TC79 503 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 TGIF2LYQ8IUE0 185 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 FTMTQ8N4E7 242 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 HPSE2Q8WWQ2 592 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 FCGR1BQ92637 280 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 MBD6Q96DN6 1003 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 OR2V2Q96R30 315 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 RAB1BQ9H0U4 201 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 NKIRAS2Q9NYR9 191 aa13.52□□□□□ -0.25
HMGA1-204ENST00000401473 A0A1W2PPK0 400 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 SC5DO75845 299 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 F12P00748 615 aaPredicted RBP13.51□□□□□ -0.25
HMGA1-204ENST00000401473 NRASP01111 189 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 IGHV4-39P01824 125 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 PAX1P15863 534 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 PTH2RP49190 550 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 RPS25P62851 125 aaKnown RBP13.51□□□□□ -0.25
HMGA1-204ENST00000401473 ZMAT1Q5H9K5 638 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 FAM209AQ5JX71 171 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 CLVS2Q5SYC1 327 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 PARP16Q8N5Y8 322 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 CCDC54Q8NEL0 328 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 OR5P3Q8WZ94 311 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 MUL1Q969V5 352 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 TMEM106AQ96A25 262 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 C10orf35Q96D05 121 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 PERPQ96FX8 193 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 OR14A2Q96R54 314 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 ADAT1Q9BUB4 502 aaKnown RBP13.51□□□□□ -0.25
HMGA1-204ENST00000401473 SLC22A4Q9H015 551 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 PLEKHA1Q9HB21 404 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 GPR173Q9NS66 373 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 IL19Q9UHD0 177 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 EDARQ9UNE0 448 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 DHDHQ9UQ10 334 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 MPC1Q9Y5U8 109 aa13.51□□□□□ -0.25
HMGA1-204ENST00000401473 IGKV1-9A0A0C4DH69 117 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 LYNX1G3V0Z9 82 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 PIN1P1O15428 100 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 CD55P08174 381 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 LYNX1P0DP58 116 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 THBS2P35442 1172 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 TNFAIP6P98066 277 aaPredicted RBP13.5□□□□□ -0.25
HMGA1-204ENST00000401473 MPPED2Q15777 294 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 Q499Y3 187 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 TMEM91Q6ZNR0 172 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 WDR86Q86TI4 376 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 TSEN15Q8WW01 171 aaKnown RBP13.5□□□□□ -0.25
HMGA1-204ENST00000401473 ITLN1Q8WWA0 313 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 DIRC2Q96SL1 478 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 GSX2Q9BZM3 304 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 CHST5Q9GZS9 411 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 PPIL3Q9H2H8 161 aaKnown RBP13.5□□□□□ -0.25
HMGA1-204ENST00000401473 TREM2Q9NZC2 230 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF879B4DU55 563 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 COL8A2P25067 703 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 GNALP38405 381 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 ATP5J2P56134 94 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 PCGF3Q3KNV8 242 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 CEACAM21Q3KPI0 293 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 ACSM3Q53FZ2 586 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 FAM76BQ5HYJ3 339 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 FAM27D1Q5T7N8 215 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 UNQ9370/PRO34162Q6UXP9 181 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 MOB3CQ70IA8 216 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 SERPINA12Q8IW75 414 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 TRMT61AQ96FX7 289 aaKnown RBP13.5□□□□□ -0.25
HMGA1-204ENST00000401473 MEGF10Q96KG7 1140 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 DECR2Q9NUI1 292 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 CACNG2Q9Y698 323 aa13.5□□□□□ -0.25
HMGA1-204ENST00000401473 JUNBP17275 347 aaPredicted RBP13.49□□□□□ -0.25
HMGA1-204ENST00000401473 EFNA4P52798 201 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 FABP5Q01469 135 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 RNF144BQ7Z419 303 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 ZDHHC23Q8IYP9 409 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 OR8S1Q8NH09 359 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 NEU4Q8WWR8 484 aaPredicted RBP13.49□□□□□ -0.25
HMGA1-204ENST00000401473 PP6455Q8WZ26 134 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 RNF170Q96K19 258 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 SAP30LQ9HAJ7 183 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 BEX4Q9NWD9 120 aaPredicted RBP13.49□□□□□ -0.25
HMGA1-204ENST00000401473 NDUFB11Q9NX14 153 aa13.49□□□□□ -0.25
HMGA1-204ENST00000401473 TRBV5-7A0A0A0MS05 114 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 CCRL2O00421 344 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 TPD52L2O43399 206 aaKnown RBP13.48□□□□□ -0.25
HMGA1-204ENST00000401473 CDC14BO60729 498 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 TFAP2AP05549 437 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 ZNF20P17024 532 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 GABRA5P31644 462 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 CD200P41217 278 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 GPM6AP51674 278 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 PRAMEF6Q5VXH4 476 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 PLCXD3Q63HM9 321 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 UTS2BQ765I0 119 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 C11orf53Q8IXP5 236 aa13.48□□□□□ -0.25
HMGA1-204ENST00000401473 OR5D14Q8NGL3 314 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms