RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 HLXQ14774 488 aaPredicted RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 BCL2L15Q5TBC7 163 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 ZBTB37Q5TC79 503 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 TMEM42Q69YG0 159 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 ZNF367Q7RTV3 350 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 LRP11Q86VZ4 500 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 FBXL14Q8N1E6 418 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 OR2AE1Q8NHA4 323 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 SYNPRQ8TBG9 265 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 GATAD2BQ8WXI9 593 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 REEP6Q96HR9 211 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 PGAM5Q96HS1 289 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 FAIMQ9NVQ4 179 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 MYEF2Q9P2K5 600 aaKnown RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 CGGBP1Q9UFW8 167 aaPredicted RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 V9GYS6 101 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 DYSFO75923 2080 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 A0A087WXM4 84 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 DHRS3O75911 302 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 CLPTM1O96005 669 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 LCKP06239 509 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 SMIM18P0DKX4 95 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 SELEP16581 610 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 CPEP16870 476 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 JUNBP17275 347 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 ACHEP22303 614 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 ACKR3P25106 362 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 LIPAP38571 399 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 DDOSTP39656 456 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 PPOXP50336 477 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 GTF2A1P52655 376 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 KLF3P57682 345 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 RPS11P62280 158 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS53-203ENST00000401468 SPATA46Q5T0L3 261 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 SYT6Q5T7P8 510 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 TMEM244Q5VVB8 128 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 AGAP6Q5VW22 663 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 PGAP1Q75T13 922 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 KLBQ86Z14 1044 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 TSPAN14Q8NG11 270 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 OR14K1Q8NGZ2 314 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 OR51E1Q8TCB6 317 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 RGP1Q92546 391 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 PPP1R14AQ96A00 147 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 C10orf35Q96D05 121 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 OPALINQ96PE5 141 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 SORCS2Q96PQ0 1159 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 VRK1Q99986 396 aaPredicted RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 SLC30A2Q9BRI3 323 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 OR51B6Q9H340 312 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 GPR84Q9NQS5 396 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 CBLN4Q9NTU7 201 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 PTTG3PQ9NZH4 202 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 MRPL15Q9P015 296 aaKnown RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 PURGQ9UJV8 347 aaKnown RBP7.81□□□□□ -1.16
VPS53-203ENST00000401468 FZR1Q9UM11 496 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 DOCK11Q5JSL3 2073 aa7.81□□□□□ -1.16
VPS53-203ENST00000401468 TRBV2A0A0J9YWF9 115 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 TRBV5-5A0A0J9YX44 114 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 LOC107986453A0A1B0GWG9 222 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CD300LBA8K4G0 201 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 VSTM5A8MXK1 200 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 LYNX1G3V0Z9 82 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 H7C417 338 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 TBX1O43435 398 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 PTBP3O95758 552 aaKnown RBP7.8□□□□□ -1.16
VPS53-203ENST00000401468 CST4P01036 141 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CD55P08174 381 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 LYNX1P0DP58 116 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 ZNF12P17014 697 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 GCH1P30793 250 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 RBMXP38159 391 aaKnown RBP7.8□□□□□ -1.16
VPS53-203ENST00000401468 MAP2K4P45985 399 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 HNRNPA0Q13151 305 aaKnown RBP7.8□□□□□ -1.16
VPS53-203ENST00000401468 MOGQ16653 247 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 TIGD6Q17RP2 521 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 ALKBH6Q3KRA9 238 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 ZNF529Q6P280 563 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 Q6ZR03 302 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 DNM1P46Q6ZS02 220 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 DOK3Q7L591 496 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CSNK2A3Q8NEV1 391 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 OR8G5Q8NG78 346 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 OR5AK2Q8NH90 309 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 MUL1Q969V5 352 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CMBLQ96DG6 245 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 MGLLQ99685 303 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 PDCD1LG2Q9BQ51 273 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 SOX7Q9BT81 388 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CCDC90BQ9GZT6 254 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CHODLQ9H9P2 273 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 CYSLTR2Q9NS75 346 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 NKIRAS2Q9NYR9 191 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 ZNF281Q9Y2X9 895 aa7.8□□□□□ -1.16
VPS53-203ENST00000401468 SF3B6Q9Y3B4 125 aaKnown RBP7.8□□□□□ -1.16
VPS53-203ENST00000401468 A0A096LNT2 108 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 MAGEA13PA6NCF6 341 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 P2RY10O00398 339 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 CRLF1O75462 422 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms