RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TROVE2P10155 538 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEDD9-203ENST00000397378 HIST1H1CP16403 213 aaKnown RBP7.59□□□□□ -1.19
NEDD9-203ENST00000397378 BMXP51813 675 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 GTF2A1P52655 376 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-203ENST00000397378 MXRA7P84157 204 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 DGCR2P98153 550 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 CD83Q01151 205 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 DGCR6Q14129 220 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 CNN3Q15417 329 aaKnown RBP7.59□□□□□ -1.19
NEDD9-203ENST00000397378 TCTEX1D4Q5JR98 221 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 UNQ9370/PRO34162Q6UXP9 181 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 LNX2Q8N448 690 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 OR4C15Q8NGM1 316 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 ANGPTL6Q8NI99 470 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 TFAP2CQ92754 450 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 GAFA1Q96PS6 74 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 TMEM120AQ9BXJ8 343 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 PRSS22Q9GZN4 317 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 RPRD1BQ9NQG5 326 aaKnown RBP7.59□□□□□ -1.19
NEDD9-203ENST00000397378 ZMAT5Q9UDW3 170 aaKnown RBP7.59□□□□□ -1.19
NEDD9-203ENST00000397378 ZNF391Q9UJN7 358 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 ENPP4Q9Y6X5 453 aa7.59□□□□□ -1.19
NEDD9-203ENST00000397378 OR6C68A6NDL8 312 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 UNC119BA6NIH7 251 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 FAM90A8PA6NJQ4 464 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 BBIP1A8MTZ0 92 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 H0YAE9 185 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 MRASO14807 208 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 H1F0P07305 194 aaKnown RBP7.58□□□□□ -1.2
NEDD9-203ENST00000397378 ACAA1P09110 424 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-203ENST00000397378 ZNF823P16415 610 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 NDUFB7P17568 137 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 PAX6P26367 422 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 FAM3AP98173 230 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 SPIBQ01892 262 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 CCDC121Q6ZUS5 278 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 CBLL1Q75N03 491 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 SLC16A9Q7RTY1 509 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 KRT77Q7Z794 578 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 CYP4Z1Q86W10 505 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 ZDHHC21Q8IVQ6 265 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 OR4K13Q8NH42 304 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 OR5K1Q8NHB7 308 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 KCNJ15Q99712 375 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 WDR13Q9H1Z4 485 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 HEXA-AS1Q9H8Q6 139 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 KRCC1Q9NPI7 259 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-203ENST00000397378 SNTG1Q9NSN8 517 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 MRGBPQ9NV56 204 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 TCF19Q9Y242 345 aa7.58□□□□□ -1.2
NEDD9-203ENST00000397378 LSM4Q9Y4Z0 139 aaKnown RBP7.58□□□□□ -1.2
NEDD9-203ENST00000397378 hCG_38984A0A1B0GV85 526 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 A6NDX4 124 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 TMEM210A6NLX4 147 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 H0YHG0 523 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 IDH3BO43837 385 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 GLCEO94923 617 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 ZNF682O95780 498 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 ALDOBP05062 364 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 SLC2A1P11166 492 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 POU1F1P28069 291 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 SLC6A6P31641 620 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 RPS27P42677 84 aaKnown RBP7.57□□□□□ -1.2
NEDD9-203ENST00000397378 PRKXP51817 358 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 SLC7A2P52569 658 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 LGALS4P56470 323 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 IL5RAQ01344 420 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 SNCBQ16143 134 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 FAM76BQ5HYJ3 339 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 FGD3Q5JSP0 725 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 KHDC1LQ5JSQ8 128 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 FKBP9P1Q75LS8 142 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 ANKRD13BQ86YJ7 626 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 MKXQ8IYA7 352 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 CSNK2A3Q8NEV1 391 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 OR5AU1Q8NGC0 362 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 HSH2DQ96JZ2 352 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 MICU1Q9BPX6 476 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 COPS4Q9BT78 406 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 OR52D1Q9H346 318 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 FN3KQ9H479 309 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 GID8Q9NWU2 228 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 PITPNC1Q9UKF7 332 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 AP3M1Q9Y2T2 418 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 LRP12Q9Y561 859 aa7.57□□□□□ -1.2
NEDD9-203ENST00000397378 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 TCRBV4S1A1TA0A5B7 111 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 ANXA2P2A6NMY6 339 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 OR2AT4A6NND4 320 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 ZNF878C9JN71 531 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 CXCR6O00574 342 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 AKR7A2O43488 359 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 TFF1P04155 84 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 PSKH1P11801 424 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 RHCEP18577 417 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 CFL1P23528 166 aaKnown RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 GNALP38405 381 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 VDAC2P45880 294 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 GMFBP60983 142 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms