RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GSX2Q9BZM3 304 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 SLIRPQ9GZT3 109 aaKnown RBP11.38□□□□□ -0.59
SEC13-209ENST00000397117 UBTD1Q9HAC8 227 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 TAS2R4Q9NYW5 299 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PTTG3PQ9NZH4 202 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 FOXJ3Q9UPW0 622 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PIGLQ9Y2B2 252 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PMF1-BGLAPU3KQ54 211 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 V9GYS6 101 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PRR14LQ5THK1 2151 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 TRAV8-7A0A075B6U6 113 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 IGHV2OR16-5A0A0B4J2B6 119 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 ANXA2P2A6NMY6 339 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 ICMTO60725 284 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 NCR1O76036 304 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 CRYAAP02489 173 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 MAS1P04201 325 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 FAM157BP0CG42 384 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 ZNF35P13682 527 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 FSTP19883 344 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 GSK3AP49840 483 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 PSMD7P51665 324 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 UCP2P55851 309 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 CAV3P56539 151 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 GK2Q14410 553 aaPredicted RBP11.37□□□□□ -0.59
SEC13-209ENST00000397117 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 RFPL4BQ6ZWI9 263 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 CROCCP3Q8IVE0 287 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 AP3S1Q92572 193 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 C10orf35Q96D05 121 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 ADAT3Q96EY9 351 aaPredicted RBP11.37□□□□□ -0.59
SEC13-209ENST00000397117 HS3ST6Q96QI5 342 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 NGBQ9NPG2 151 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 NPAP1Q9NZP6 1156 aa11.37□□□□□ -0.59
SEC13-209ENST00000397117 AK6Q9Y3D8 172 aaKnown RBP11.37□□□□□ -0.59
SEC13-209ENST00000397117 hCG_38984A0A1B0GV85 526 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 GGT3PA6NGU5 568 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
SEC13-209ENST00000397117 PAX1P15863 534 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 FAHP16930 419 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 RAB3AP20336 220 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 THBS4P35443 961 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 PTH2RP49190 550 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 PPP1CBP62140 327 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 FAM3AP98173 230 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 NAAAQ02083 359 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 CEP78Q5JTW2 689 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 TMEM108Q6UXF1 575 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 Q6ZSR3 168 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 PP6455Q8WZ26 134 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 BCL2L14Q9BZR8 327 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 ZCCHC4Q9H5U6 513 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 SPEF1Q9Y4P9 236 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 ABCA1O95477 2261 aa11.36□□□□□ -0.59
SEC13-209ENST00000397117 MEGF11A6BM72 1044 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 ERCC1P07992 297 aaPredicted RBP11.35□□□□□ -0.59
SEC13-209ENST00000397117 IGFBP3P17936 291 aaPredicted RBP11.35□□□□□ -0.59
SEC13-209ENST00000397117 TUBG1P23258 451 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 DDOSTP39656 456 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 OR10A3P58181 314 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 HLXQ14774 488 aaPredicted RBP11.35□□□□□ -0.59
SEC13-209ENST00000397117 OR8B8Q15620 311 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 SPATA46Q5T0L3 261 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 C22orf34Q6ZV56 151 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 LRRTM1Q86UE6 522 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 C1orf174Q8IYL3 243 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 FTMTQ8N4E7 242 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 OR1J1Q8NGS3 322 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 OR13C9Q8NGT0 318 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 ITFG2Q969R8 447 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 BARHL1Q9BZE3 327 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 NXF2Q9GZY0 626 aaKnown RBP11.35□□□□□ -0.59
SEC13-209ENST00000397117 POFUT1Q9H488 388 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 TUBG2Q9NRH3 451 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 A3GALT2U3KPV4 340 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 NOTOA8MTQ0 251 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 MAGEB3O15480 346 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 CRLF1O75462 422 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 THBDP07204 575 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 ACKR3P25106 362 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 CD40P25942 277 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 CALCRP30988 508 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 PRSS12P56730 875 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 KRTAP1-1Q07627 177 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 SPOCK1Q08629 439 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 IDNKQ5T6J7 187 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 SFXN4Q6P4A7 337 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 OR2J1Q9GZK6 312 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 C6orf62Q9GZU0 229 aaPredicted RBP11.35□□□□□ -0.59
SEC13-209ENST00000397117 MMP27Q9H306 513 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 DAPK2Q9UIK4 370 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 V9GY05 133 aa11.35□□□□□ -0.59
SEC13-209ENST00000397117 ZNF816-ZNF321PA0A0X1KG74 233 aa11.34□□□□□ -0.59
SEC13-209ENST00000397117 SULT1B1O43704 296 aa11.34□□□□□ -0.59
SEC13-209ENST00000397117 ADRA2CP18825 462 aa11.34□□□□□ -0.59
SEC13-209ENST00000397117 PTAFRP25105 342 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms