RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CATSPERDQ86XM0 798 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 ASB5Q8WWX0 329 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 NDRG3Q9UGV2 375 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 NYNRINQ9P2P1 1898 aaKnown RBP14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 TRIM77I1YAP6 450 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 ACTL6BO94805 426 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF250P15622 560 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 NXPH1P58417 271 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 FAHD2BQ6P2I3 314 aaPredicted RBP14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 Q7L0L9 218 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 FAHD2AQ96GK7 314 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 GNG12Q9UBI6 72 aa14.39□□□□□ -0.11
PTPRN2-201ENST00000389413 C17orf112F2Z3M2 114 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 SPRY1O43609 319 aaPredicted RBP14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 FUT6P51993 359 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 NAA40Q86UY6 237 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 HGDQ93099 445 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 SUCNR1Q9BXA5 334 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 PATJQ8NI35 1801 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 TET1Q8NFU7 2136 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF724A8MTY0 619 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 DHRS3O75911 302 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 BGLAPP02818 100 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 GABRA2P47869 451 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 C12orf49Q9H741 205 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 TIMM8AO60220 97 aaPredicted RBP14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 CDC14BO60729 498 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 TBC1D28Q2M2D7 210 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 LRRTM1Q86UE6 522 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 BPIFCQ8NFQ6 507 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 AKR7LQ8NHP1 331 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 CHST6Q9GZX3 395 aa14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 GOLGB1Q14789 3259 aaKnown RBP14.38□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF816-ZNF321PA0A0X1KG74 233 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 C5orf49A4QMS7 147 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 TMIGD3P0DMS9 266 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 BCKDHBP21953 392 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 CLDN15P56746 228 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 HNF4GQ14541 408 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 CST9LP1Q5W188 147 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 KCNIP4Q6PIL6 250 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 DRAM2Q6UX65 266 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 LYPD8Q6UX82 237 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 DMBX1Q8NFW5 382 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ALKBH3Q96Q83 286 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 PRRX2Q99811 253 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF768Q9H5H4 540 aaKnown RBP14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF107Q9UII5 783 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ZFP92A6NM28 416 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ANKRD34CP0C6C1 535 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 OR3A4PP47883 348 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 BAXQ07812 192 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 LTC4SQ16873 150 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 SFTPA2Q8IWL1 248 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 OR1F12Q8NHA8 337 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 RDH5Q92781 318 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 GCM1Q9NP62 436 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 B3GALNT1O75752 331 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 GLRA1P23415 457 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 CEACAM16Q2WEN9 425 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 FAM185AQ8N0U4 392 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 NUBPLQ8TB37 319 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 PLK3Q9H4B4 646 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF230Q9UIE0 474 aaPredicted RBP14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 KCNE5Q9UJ90 142 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 A0A096LPE4 126 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 A0A1W2PPZ6 126 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 SSSCA1O60232 199 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 CST4P01036 141 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 GLAP06280 429 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 FBXL14Q8N1E6 418 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 ROBO4Q8WZ75 1007 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 CXorf58Q96LI9 332 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 RTL8AQ9BWD3 113 aa14.37□□□□□ -0.11
PTPRN2-201ENST00000389413 TSTD3H0UI37 97 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 CBR1P16152 277 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 RHBDD2Q6NTF9 364 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 TMEM178AQ8NBL3 297 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 KLHDC2Q9Y2U9 406 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 TNFSF4P23510 183 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 ARR3P36575 388 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 GSK3AP49840 483 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 CLN3Q13286 438 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 OR2V1Q8NHB1 315 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 GNRHR2Q96P88 292 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 FOXB1Q99853 325 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 CABIN1Q9Y6J0 2220 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 OR2C1O95371 312 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 RPS4Y1P22090 263 aaKnown RBP14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 EFNB2P52799 333 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 RRADP55042 308 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 RAB11AP62491 216 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 KIAA0141Q14154 515 aaPredicted RBP14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 RAB35Q15286 201 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 ZNF573Q86YE8 665 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 OR5AP2Q8NGF4 316 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 LINC00052Q96N35 136 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 FN3KRPQ9HA64 309 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 CRLF2Q9HC73 371 aa14.36□□□□□ -0.11
PTPRN2-201ENST00000389413 RNASEK-C17orf49H0YIS7 233 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms