RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ARF1P84077 181 aaKnown RBP16.75■□□□□ 0.27
GMDS-201ENST00000380805 RTP5Q14D33 572 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 SF3B4Q15427 424 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■□□□ 12.4
GMDS-201ENST00000380805 RNFT1Q5M7Z0 435 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 OR56B1Q8NGI3 324 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 APH1AQ96BI3 265 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 NICN1Q9BSH3 213 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 URM1Q9BTM9 101 aaKnown RBP16.75■□□□□ 0.27
GMDS-201ENST00000380805 TM2D1Q9BX74 207 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 C1QTNF5Q9BXJ0 243 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 RANBP3Q9H6Z4 567 aaPredicted RBP16.75■□□□□ 0.27
GMDS-201ENST00000380805 CALHM2Q9HA72 323 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 BEX1Q9HBH7 125 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 B3GNT2Q9NY97 397 aa16.75■□□□□ 0.27
GMDS-201ENST00000380805 FREM1Q5H8C1 2179 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 TRGV5A0A0B4J1U4 118 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 hCG_38984A0A1B0GV85 526 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 MPIG6BO95866 241 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 LCATP04180 440 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 VSIG10L2P0DP72 767 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 HIST1H1DP16402 221 aaKnown RBP16.74■□□□□ 0.27
GMDS-201ENST00000380805 OR8B8Q15620 311 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 PNLIPRP3Q17RR3 467 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 PABPC1L2AQ5JQF8 200 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 TRAPPC6BQ86SZ2 158 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 OR8S1Q8NH09 359 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 OR2AE1Q8NHA4 323 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 DVL3Q92997 716 aaPredicted RBP16.74■□□□□ 0.27
GMDS-201ENST00000380805 SEC22CQ9BRL7 303 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 PRRG4Q9BZD6 226 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 SLA2Q9H6Q3 261 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 PLSCR3Q9NRY6 295 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 SPRR3Q9UBC9 169 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 ZNF222Q9UK12 451 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 ING4Q9UNL4 249 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 ZNF175Q9Y473 711 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 RTTNQ86VV8 2226 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 MYO7BQ6PIF6 2116 aa16.74■□□□□ 0.27
GMDS-201ENST00000380805 MFNGO00587 321 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 XRCC2O43543 280 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 SSX5O60225 188 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 IGHV3-9P01782 118 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 NAT1P18440 290 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 WT1P19544 449 aaPredicted RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 SRSF6Q13247 344 aaKnown RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 PLAC9Q5JTB6 97 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 ZBTB37Q5TC79 503 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 LAMTOR1Q6IAA8 161 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 ASCC1Q8N9N2 400 aaKnown RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 CHST4Q8NCG5 386 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 CPNE2Q96FN4 548 aaPredicted RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 TMEM246Q9BRR3 403 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 GON7Q9BXV9 100 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 SELENOIQ9C0D9 397 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 ZNF436Q9C0F3 470 aaPredicted RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 TINAGL1Q9GZM7 467 aaPredicted RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 DLL4Q9NR61 685 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 UPB1Q9UBR1 384 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 MSRB2Q9Y3D2 182 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 BOLA1Q9Y3E2 137 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 CEP295Q9C0D2 2601 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 OR14I1A6ND48 311 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 SMLR1H3BR10 107 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 IGHG3P01860 377 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 GNB3P16520 340 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 TMEM50BP56557 158 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 CNN3Q15417 329 aaKnown RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 Q5BKY6 102 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 PLXDC2Q6UX71 529 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 CPEB3Q8NE35 698 aaKnown RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 FDCSPQ8NFU4 85 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 DACT3Q96B18 629 aaPredicted RBP16.73■□□□□ 0.27
GMDS-201ENST00000380805 RAB3CQ96E17 227 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 SCP2D1Q9UJQ7 156 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 KCNK7Q9Y2U2 307 aa16.73■□□□□ 0.27
GMDS-201ENST00000380805 NCOR2Q9Y618 2525 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 A0A1W2PP11 408 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 SOCS1O15524 211 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 CRTAPO75718 401 aaPredicted RBP16.72■□□□□ 0.27
GMDS-201ENST00000380805 FCGR2AP12318 317 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 PRKACBP22694 351 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 FAM3AP98173 230 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 C3AR1Q16581 482 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 CHMP1BQ7LBR1 199 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 C1QL2Q7Z5L3 287 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 C9orf62Q8N4C0 152 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 STEAP2Q8NFT2 490 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 NUDCD2Q8WVJ2 157 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 TNFAIP8L1Q8WVP5 186 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 TECTBQ96PL2 329 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 DEFB127Q9H1M4 99 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 ZFHX4Q86UP3 3567 aa16.72■□□□□ 0.27
GMDS-201ENST00000380805 MED19A0JLT2 244 aaPredicted RBP16.71■□□□□ 0.27
GMDS-201ENST00000380805 CA11O75493 328 aa16.71■□□□□ 0.27
GMDS-201ENST00000380805 AMY2AP04746 511 aa16.71■□□□□ 0.27
GMDS-201ENST00000380805 EDN3P14138 238 aa16.71■□□□□ 0.27
GMDS-201ENST00000380805 ZNF24P17028 368 aa16.71■□□□□ 0.27
GMDS-201ENST00000380805 CLVS2Q5SYC1 327 aa16.71■□□□□ 0.27
GMDS-201ENST00000380805 ASCL4Q6XD76 172 aa16.71■□□□□ 0.27
GMDS-201ENST00000380805 IDO2Q6ZQW0 420 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms