RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RAB27BO00194 218 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 CCSO14618 274 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 OR2J2O76002 312 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 PNPP00491 289 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 CRYBA1P05813 215 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 ERCC1P07992 297 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 FBXO45P0C2W1 286 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 SPP1P10451 314 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 HPGDP15428 266 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 CRABP1P29762 137 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 PMELP40967 661 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 RPL27P61353 136 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 PEA15Q15121 130 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 EBPQ15125 230 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 SGCBQ16585 318 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MST1LQ2TV78 715 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TMEM128Q5BJH2 165 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 BEX5Q5H9J7 111 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TRAPPC6BQ86SZ2 158 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 LSRQ86X29 649 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 HOGA1Q86XE5 327 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 CBLN2Q8IUK8 224 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MISPQ8IVT2 679 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 OR4A4PQ8NGN8 299 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 OR52N5Q8NH56 324 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 NUDCD2Q8WVJ2 157 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 DCUN1D4Q92564 292 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 OR5B2Q96R09 309 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 RNF126Q9BV68 326 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 PTDSS2Q9BVG9 487 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 WWTR1Q9GZV5 400 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 KCNK15Q9H427 330 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TUBA4BQ9H853 241 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MYOTQ9UBF9 498 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MAP1BP46821 2468 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MEX3AA1L020 520 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 C5orf51A6NDU8 294 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TMEM235A6NFC5 223 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MFNGO00587 321 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 IFNA6P05013 189 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 S100A9P06702 114 aaKnown RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 CHRM2P08172 466 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 SERPINF1P36955 418 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MLF1P58340 268 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 ECH1Q13011 328 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 LY6DQ14210 128 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 PLEKHN1Q494U1 663 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 VAX1Q5SQQ9 334 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 CORO6Q6QEF8 472 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 C5orf46Q6UWT4 87 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 UNQ6126/PRO20091Q6UXV3 157 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 KDM8Q8N371 416 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 ARRDC1Q8N5I2 433 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 OR13C3Q8NGS6 347 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 OR6S1Q8NH40 331 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 NUBPLQ8TB37 319 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 PHOSPHO1Q8TCT1 267 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 RXFP4Q8TDU9 374 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TAAR8Q969N4 342 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 KTI12Q96EK9 354 aaPredicted RBP10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 ZNF251Q9BRH9 671 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 ABHD6Q9BV23 337 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TXNIPQ9H3M7 391 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 SEC61A2Q9H9S3 476 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 ACKR4Q9NPB9 350 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TP53TG5Q9Y2B4 290 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 TMED7Q9Y3B3 224 aa10.11□□□□□ -0.79
TSPAN1-201ENST00000372003 MGAQ8IWI9 3026 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 HEATR5AQ86XA9 2040 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 DSPP15924 2871 aaKnown RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 COLCA2A8K830 154 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 H7C1C5 153 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 UBE2CO00762 179 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ZNF354AO60765 605 aaPredicted RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 SFT2D2O95562 160 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 HLA-DQA2P01906 255 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 SPARCP09486 303 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 NPBWR1P48145 328 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 LCN6P62502 163 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ARG2P78540 354 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 MFGE8Q08431 387 aaPredicted RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 MFAP5Q13361 173 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ATXN7L3Q14CW9 347 aaPredicted RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 PCK2Q16822 640 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ODF4Q2M2E3 257 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ZNF468Q5VIY5 522 aaPredicted RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 MDGA2Q7Z553 956 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 PRR22Q8IZ63 422 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 TMEM156Q8N614 296 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 COMMD1Q8N668 190 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ZNF563Q8TA94 476 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ADIPOR1Q96A54 375 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 RASL10BQ96S79 203 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 NXF5Q9H1B4 397 aaKnown RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 RHOFQ9HBH0 211 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 MRPL22Q9NWU5 206 aaKnown RBP10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 ABI3Q9P2A4 366 aa10.1□□□□□ -0.79
TSPAN1-201ENST00000372003 GTF2A1LQ9UNN4 478 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms