RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 MVB12AQ96EY5 273 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 KLK11Q9UBX7 282 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 TUBGCP6Q96RT7 1819 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 A0A1B0GWA3 101 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 HRO43593 1189 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 ERVS71-1P61550 626 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 ERV3-1Q14264 604 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 LINC00303Q3SY05 128 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 VWA2Q5GFL6 755 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 LILRB1Q8NHL6 650 aaPredicted RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 TEX37Q96LM6 180 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 MAP1LC3CQ9BXW4 147 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 EPXP11678 715 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 SCGB1A1P11684 91 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 FBXL14Q8N1E6 418 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 SMIM19Q96E16 107 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 C16orf70Q9BSU1 422 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 GNG4P50150 75 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 CXorf36Q9H7Y0 433 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 ZNF98A6NK75 572 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 LIMS3P0CW19 117 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 LIMS4P0CW20 117 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 PSMB5P28074 263 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 PCYT2Q99447 389 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 CLEC14AQ86T13 490 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 KMT2EQ8IZD2 1858 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 TMEM99Q8N816 258 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 FGF13Q92913 245 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 MCHR2Q969V1 340 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 ARRDC3Q96B67 414 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 ZC3HAV1LQ96H79 300 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 IL21Q9HBE4 155 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 CNOT1A5YKK6 2376 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 TNFRSF10CO14798 259 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 WDR1O75083 606 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 IL5P05113 134 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 TJP1Q07157 1748 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 LOC107986453A0A1B0GWG9 222 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 TARM1B6A8C7 271 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 OPN1MWP04001 364 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 OPN1MW2P0DN77 364 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 OPN1MW3P0DN78 364 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 C15orf39Q6ZRI6 1047 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 DUSP21Q9H596 190 aa11.96□□□□□ -0.49
SRGAP3-201ENST00000360413 H0YIG0 161 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 ALOX12BO75342 701 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 CST4P01036 141 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 CA3P07451 260 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 SEMA3BQ13214 749 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 FAM209AQ5JX71 171 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 ZDHHC23Q8IYP9 409 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 ADGRG7Q96K78 797 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 MPDZO75970 2070 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM218A2RU14 115 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 DSCR3O14972 297 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 NEURL1O76050 574 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 FGF2P09038 288 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 PRRX1P54821 245 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 CLDN2P57739 230 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 CD81P60033 236 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 CALHM3Q86XJ0 350 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 RPL27P61353 136 aaKnown RBP11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 ATP6V1FQ16864 119 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 PNLIPRP3Q17RR3 467 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 COX19Q49B96 90 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 LIPNQ5VXI9 398 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 NUDCD2Q8WVJ2 157 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 STARD4Q96DR4 205 aa11.96□□□□□ -0.5
SRGAP3-201ENST00000360413 ITGB4P16144 1822 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 MEIKINA0A087WXM9 373 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 SEMA7AO75326 666 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ARG1P05089 322 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 OPRM1P35372 400 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 FUNDC1Q8IVP5 155 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF738Q8NE65 137 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 SPTAN1Q13813 2472 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 TMEM128Q5BJH2 165 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 MIEN1Q9BRT3 115 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 HAPLN2Q9GZV7 340 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 LPAR5Q9H1C0 372 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 CST7O76096 145 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 RBM45Q8IUH3 476 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 LTB4R2Q9NPC1 389 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 ST3GAL2Q16842 350 aa11.95□□□□□ -0.5
SRGAP3-201ENST00000360413 DPPA3Q6W0C5 159 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms