RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CACNA1FO60840 1977 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 IGKV1-8A0A0C4DH67 115 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ANKRD65E5RJM6 399 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 DFFAO00273 331 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TOR1AO14656 332 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SLC16A7O60669 478 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TBL1XO60907 577 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF30P17039 623 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TBPP20226 339 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GATA2P23769 480 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ALDH3A1P30838 453 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PRLHRP49683 370 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 BLVRAP53004 296 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 HCCSP53701 268 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GNG11P61952 73 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SEMG2Q02383 582 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TWF1Q12792 350 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 KRTAP27-1Q3LI81 207 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TPTE2P1Q5T6R2 138 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 DUPD1Q68J44 220 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FAHD1Q6P587 224 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CEMP1Q6PRD7 247 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 BAIAP2L2Q6UXY1 529 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CERS6Q6ZMG9 384 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM25Q86YD3 366 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 FUNDC1Q8IVP5 155 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RNF10Q8N5U6 811 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 OR7G1Q8NGA0 311 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 LGALS14Q8TCE9 139 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 DNAJB3Q8WWF6 145 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GEMIN6Q8WXD5 167 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TRNT1Q96Q11 434 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SPACA5Q96QH8 159 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PYGO2Q9BRQ0 406 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 POLR2J2Q9GZM3 115 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SLIRPQ9GZT3 109 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 GFRA4Q9GZZ7 299 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 POLR2J3Q9H1A7 115 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF107Q9UII5 783 aaPredicted RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PPIL1Q9Y3C6 166 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 NIPBLQ6KC79 2804 aaeCLIP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 KLF18A0A0U1RQI7 1052 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SULT1C2O00338 296 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 HCRTR1O43613 425 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 MGRN1O60291 552 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 AQP8O94778 261 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CDK14O94921 469 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 IGKV1D-16P01601 117 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PRPS2P11908 318 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 COX7A1P24310 79 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 NTSP30990 170 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 MAGEA3P43357 314 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RANBP1P43487 201 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 DLX1P56177 255 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CLDN6P56747 220 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 OR10A3P58181 314 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ADARB1P78563 741 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 TLE4Q04727 773 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CKAP4Q07065 602 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZBTB6Q15916 424 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ATP6V1FQ16864 119 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CDKL4Q5MAI5 379 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 MOB1BQ7L9L4 216 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF645Q8N7E2 425 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 LRRC45Q96CN5 670 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PIK3IP1Q96FE7 263 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 RNF185Q96GF1 192 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 C7orf50Q9BRJ6 194 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 CNPY3Q9BT09 278 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 MRM3Q9HC36 420 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 SENP1Q9P0U3 644 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 DEC1Q9P2X7 70 aa1.19□□□□□ -2.22
BRCA1-202ENST00000354071 PAIP2BQ9ULR5 123 aaKnown RBP1.19□□□□□ -2.22
BRCA1-202ENST00000354071 ATP7BP35670 1465 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ANKRD11Q6UB99 2663 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 IGHV7-81A0A0B4J1V7 117 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 HACD1B0YJ81 288 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 XKRYO14609 159 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 NIPSNAP2O75323 286 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 DHRS3O75911 302 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 YEATS4O95619 227 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 HSPB1P04792 205 aaKnown RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PGAM1P18669 254 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 M6PRP20645 277 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 MAGP20916 626 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 AK4P27144 223 aaPredicted RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PSMD7P51665 324 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 PLK1P53350 603 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 NRF1Q16656 503 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 C9orf129Q5T035 196 aaKnown RBP1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ANKRD22Q5VYY1 191 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 C2orf66Q6UXQ4 117 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TMUB2Q71RG4 321 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 TMEM150AQ86TG1 271 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 RAB43Q86YS6 212 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF565Q8N9K5 539 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 GATSQ8NAP1 163 aa1.18□□□□□ -2.22
BRCA1-202ENST00000354071 VN1R2Q8NFZ6 395 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms