RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 C5orf66Q9H5L9 145 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 ZDHHC6Q9H6R6 413 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 SZT2Q5T011 3432 aa9.46□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF320A2RRD8 509 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 WIPF3A6NGB9 483 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 C17orf105B2RV13 164 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CLDN34H7C241 214 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SLC17A2O00624 439 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 BNIP3LO60238 219 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 UPK3AO75631 287 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SCGB1D2O95969 90 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CATP04040 527 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 OR5G3P0C626 314 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 HOXB2P14652 356 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SERPINA4P29622 427 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CCKBRP32239 447 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 FRKP42685 505 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CDC34P49427 236 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 ASCL1P50553 236 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SUPT4H1P63272 117 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 HLA-DRB3P79483 266 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 MRPL49Q13405 166 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM128Q5BJH2 165 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 COA6Q5JTJ3 125 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 GLYATL3Q5SZD4 288 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 OGFOD3Q6PK18 319 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TOMM20LQ6UXN7 152 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SPRED2Q7Z698 418 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 ADIPOR2Q86V24 386 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 C10orf53Q8N6V4 93 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SLC26A10Q8NG04 563 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TSEN15Q8WW01 171 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 MRM2Q9UI43 246 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 IER3IP1Q9Y5U9 82 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 WSB1Q9Y6I7 421 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 MYO9BQ13459 2157 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TRBV5-7A0A0A0MS05 114 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 FAM221AA4D161 298 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 C1QTNF3-AMACRE9PGA6 284 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 STATHP02808 62 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SEC11BP0C7V7 166 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CXCR1P25024 350 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 BSGP35613 385 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 OR3A2P47893 321 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF136P52737 540 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SUCLG1P53597 346 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SCAND1P57086 179 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 IL15RAQ13261 267 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 PCK2Q16822 640 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM240Q5SV17 173 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 PLXDC2Q6UX71 529 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM108Q6UXF1 575 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 NUP54Q7Z3B4 507 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CMKLR1Q99788 373 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 IKZF2Q9UKS7 526 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 OSGIN2Q9Y236 505 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TSPAN6O43657 245 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 KAT7O95251 611 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SFT2D2O95562 160 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CORO1AP31146 461 aaKnown RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 BMI1P35226 326 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 OTPQ5XKR4 325 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CRIPAKQ8N1N5 446 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CHST4Q8NCG5 386 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 AQP3Q92482 292 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TOMM40LQ969M1 308 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CYYR1Q96J86 154 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CIB3Q96Q77 187 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 SLCO5A1Q9H2Y9 848 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 CNTD2Q9H8S5 307 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 GPR35Q9HC97 309 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 ADAP2Q9NPF8 381 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF443Q9Y2A4 671 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 ARID1BQ8NFD5 2236 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-203ENST00000349748 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 SOX1O00570 391 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-203ENST00000349748 SCDO00767 359 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 COCHO43405 550 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 CTSBP07858 339 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 CCKARP32238 428 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 RND2P52198 227 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 CLDN6P56747 220 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 PLAURQ03405 335 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ICAM4Q14773 271 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 IAH1Q2TAA2 248 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ASPHD2Q6ICH7 369 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 OR2AP1Q8NGE2 309 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 WFDC5Q8TCV5 224 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 SCAMP4Q969E2 229 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 TSSK2Q96PF2 358 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 LYSMD1Q96S90 227 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 PRRX2Q99811 253 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF700Q9H0M5 742 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 AHSPQ9NZD4 102 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms