RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ANKUB1A6NFN9 424 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 ADAM10O14672 748 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 TIAF1O95411 115 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 CRYBA1P05813 215 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 LTBRP36941 435 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 TAS2R31P59538 309 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 TSPO2Q5TGU0 170 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 ALKBH2Q6NS38 261 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 PEG10Q86TG7 708 aaKnown RBP12.7□□□□□ -0.38
CPSF7-201ENST00000340437 OR5AS1Q8N127 324 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 AKR1E2Q96JD6 320 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 PLEKHJ1Q9NW61 149 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 GPR132Q9UNW8 380 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF175Q9Y473 711 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 B3GALT1Q9Y5Z6 326 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 PI4KAP42356 2102 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 CCDC163A0A0D9SF12 145 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 LMO7DNF2Z398 122 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 CD27P26842 260 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 RAB11FIP2Q7L804 512 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 DTWD2Q8NBA8 298 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 RPS10P5Q9NQ39 176 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 LOC390937A0A1W2PQ73 354 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 M0R036 132 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 MBTPS2O43462 519 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 XRCC2O43543 280 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 NME2P1O60361 137 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 SNAPINO95295 136 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 DIRAS3O95661 229 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
CPSF7-201ENST00000340437 LPAR6P43657 344 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 OR56B1Q8NGI3 324 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 ASB13Q8WXK3 278 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF2Q9BSG1 426 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-201ENST00000340437 AKIRIN1Q9H9L7 192 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-201ENST00000340437 COL6A3P12111 3177 aa12.7□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF98A6NK75 572 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 MASP2O00187 686 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 GLAP06280 429 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 CHRM2P08172 466 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 PNLIPP16233 465 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 QRFPP83859 136 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 RIPPLY1Q0D2K3 151 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 KISS1Q15726 138 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 RXFP4Q8TDU9 374 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 REEP6Q96HR9 211 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-201ENST00000340437 SULT4A1Q9BR01 284 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 UQCC2Q9BRT2 126 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 CYTL1Q9NRR1 136 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 SLC2A8Q9NY64 477 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 TTLL8A6PVC2 850 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF850A8MQ14 1090 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 GDF9O60383 454 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 TAF9Q16594 264 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 KRBOX4Q5JUW0 171 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.69□□□□□ -0.38
CPSF7-201ENST00000340437 OR2AE1Q8NHA4 323 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 GPR173Q9NS66 373 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 IGKV1D-8A0A087WSZ0 117 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 RAB19A4D1S5 217 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 SPRY1O43609 319 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-201ENST00000340437 PRH1P02810 166 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 SUPT4H1P63272 117 aaKnown RBP12.69□□□□□ -0.38
CPSF7-201ENST00000340437 ACY1Q03154 408 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 PEA15Q15121 130 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 RAB30Q15771 203 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 PHLDA2Q53GA4 152 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 APCDD1LQ8NCL9 501 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 OR5T2Q8NGG2 359 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 ISOC2Q96AB3 205 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 C14orf79Q96F83 325 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 RTBDNQ9BSG5 229 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF581Q9P0T4 197 aa12.69□□□□□ -0.38
CPSF7-201ENST00000340437 NCOA6Q14686 2063 aaPredicted RBP12.69□□□□□ -0.38
CPSF7-201ENST00000340437 RAB13P51153 203 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 PJVKQ0ZLH3 352 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 DEGS2Q6QHC5 323 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 Q6ZRG5 221 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 SECTM1Q8WVN6 248 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 ST8SIA1Q92185 356 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 MYOZ1Q9NP98 299 aaPredicted RBP12.68□□□□□ -0.38
CPSF7-201ENST00000340437 ALKBH4Q9NXW9 302 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 B3GAT1Q9P2W7 334 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 PIGLQ9Y2B2 252 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 B3GALT5Q9Y2C3 310 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 IGKV1-9A0A0C4DH69 117 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 RNASEK-C17orf49H0YIS7 233 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 K7EPK0 472 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 TO15178 435 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 PATE4P0C8F1 98 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
CPSF7-201ENST00000340437 NKAIN1Q4KMZ8 207 aa12.68□□□□□ -0.38
CPSF7-201ENST00000340437 THEM4Q5T1C6 240 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms