RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 SEMA6AQ9H2E6 1030 aa11.65□□□□□ -0.54
COMMD4-202ENST00000338995 ZNF391Q9UJN7 358 aa11.65□□□□□ -0.54
COMMD4-202ENST00000338995 RHBDD3Q9Y3P4 386 aa11.65□□□□□ -0.54
COMMD4-202ENST00000338995 A0A1W2PPH5 198 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 H0YAE9 185 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 GLCEO94923 617 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 GASTP01350 101 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 GYPBP06028 91 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 H2BFMP0C1H6 154 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ZNF3P17036 446 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 SAA4P35542 130 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 CAV3P56539 151 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ZNF121P58317 390 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-202ENST00000338995 CRMP1Q14194 572 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 SPATS1Q496A3 300 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 LYPD4Q6UWN0 246 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 WDR86Q86TI4 376 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 Q8N7P7 452 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 OR6N2Q8NGY6 317 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ZNF671Q8TAW3 534 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 RNF133Q8WVZ7 376 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 PIGCQ92535 297 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ITFG2Q969R8 447 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 DUS3LQ96G46 650 aaKnown RBP11.64□□□□□ -0.55
COMMD4-202ENST00000338995 CLPTM1LQ96KA5 538 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 RAB3IPQ96QF0 476 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-202ENST00000338995 CDRT15Q96T59 188 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 SSX3Q99909 188 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
COMMD4-202ENST00000338995 ABHD6Q9BV23 337 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 BRD7Q9NPI1 651 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 SNTG1Q9NSN8 517 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 NDE1Q9NXR1 346 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 DNAJC27Q9NZQ0 273 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 MAB21L2Q9Y586 359 aa11.64□□□□□ -0.55
COMMD4-202ENST00000338995 hCG_38984A0A1B0GV85 526 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 A0A1B0GW55 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 hCG_1809904A0A1W2PP81 198 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 A0A1W2PPE2 198 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 A0A1W2PR64 198 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 A0A1W2PRV1 198 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 ZNF850A8MQ14 1090 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 H3BUX3 64 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 OPN1MWP04001 364 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 ACAA1P09110 424 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L2P0CJ85 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L3P0CJ86 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L4P0CJ87 422 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L5P0CJ88 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L6P0CJ89 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L7P0CJ90 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 OPN1MW2P0DN77 364 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 OPN1MW3P0DN78 364 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 PAICSP22234 425 aaKnown RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 GLRA1P23415 457 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 GSTT1P30711 240 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 GABRA2P47869 451 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 EMX1Q04741 257 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 AANATQ16613 207 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4L9Q6RFH8 374 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 ERI1Q8IV48 349 aaKnown RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 FGFRL1Q8N441 504 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 OR9Q2Q8NGE9 314 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 RPL3LQ92901 407 aaKnown RBP11.63□□□□□ -0.55
COMMD4-202ENST00000338995 TNFRSF14Q92956 283 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 PPP1R14AQ96A00 147 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 OTULINQ96BN8 352 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 ITPKCQ96DU7 683 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 SEH1LQ96EE3 360 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 NMNAT2Q9BZQ4 307 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 MYLK2Q9H1R3 596 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 DUX4Q9UBX2 424 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 LYVE1Q9Y5Y7 322 aa11.63□□□□□ -0.55
COMMD4-202ENST00000338995 TET2Q6N021 2002 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-202ENST00000338995 TRBV23-1A0A0A0MS06 115 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 OR2AT4A6NND4 320 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 ARPC2O15144 300 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 SIGLEC5O15389 551 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 CST4P01036 141 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 MSX2P35548 267 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-202ENST00000338995 LGALS4P56470 323 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 ELF3P78545 371 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-202ENST00000338995 PRDX4Q13162 271 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 KLRD1Q13241 179 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 FAM76BQ5HYJ3 339 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 C16orf89Q6UX73 402 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 AQP11Q8NBQ7 271 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 ANGPTL6Q8NI99 470 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 OR5P3Q8WZ94 311 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 BTBD10Q9BSF8 475 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 NPFFR1Q9GZQ6 430 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 MEGF9Q9H1U4 602 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 RANBP3Q9H6Z4 567 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-202ENST00000338995 FAM53CQ9NYF3 392 aa11.62□□□□□ -0.55
COMMD4-202ENST00000338995 NLKQ9UBE8 527 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms