RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HRH1P35367 487 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF709Q8N972 641 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 FAM181AQ8N9Y4 354 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 SLC38A9Q8NBW4 561 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 OR52N4Q8NGI2 321 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 OR51A4Q8NGJ6 313 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 SCARB1Q8WTV0 552 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 GLYATL2Q8WU03 294 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 TRAPPC2LQ9UL33 140 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 FNDC1Q4ZHG4 1894 aaPredicted RBP5.59□□□□□ -1.52
PRKDC-202ENST00000338368 PRR19A6NJB7 356 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 EPHA1P21709 976 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 ARR3P36575 388 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF774Q6NX45 483 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 LGI3Q8N145 548 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 SPSB1Q96BD6 273 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 AIFM2Q9BRQ8 373 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 SF3B5Q9BWJ5 86 aaKnown RBP5.59□□□□□ -1.52
PRKDC-202ENST00000338368 FBXO4Q9UKT5 387 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 FREM3P0C091 2139 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 SLC33A1O00400 549 aaPredicted RBP5.59□□□□□ -1.52
PRKDC-202ENST00000338368 PIN1P1O15428 100 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 WNT11O96014 354 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 TTRP02766 147 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 HAAOP46952 286 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 ARRDC1Q8N5I2 433 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 APCDD1LQ8NCL9 501 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 PAQR8Q8TEZ7 354 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 ZNRF4Q8WWF5 429 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 UQCC2Q9BRT2 126 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 SPACA1Q9HBV2 294 aa5.59□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF816-ZNF321PA0A0X1KG74 233 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 AGPAT2O15120 278 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 GSTZ1O43708 216 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 HLA-DQB1P01920 261 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 PDGFAP04085 211 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 GSG1Q2KHT4 349 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 HES3Q5TGS1 186 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 LIN37Q96GY3 246 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 NMNAT2Q9BZQ4 307 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 IGHV3-64DA0A0J9YX35 117 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 PMS2P1A4D2B8 440 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 H7C2Y5 167 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 K7EPK0 472 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 PTGFRP43088 359 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 RPS4XP62701 263 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 SSBP1Q04837 148 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 RAB35Q15286 201 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ESCO2Q56NI9 601 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 FAM71E2Q8N5Q1 922 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF680Q8NEM1 530 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 WDR89Q96FK6 387 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 UBL7Q96S82 380 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ARPC5LQ9BPX5 153 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 CNTD2Q9H8S5 307 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 HS3ST3B1Q9Y662 390 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 PHF1O43189 567 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 FBXO24O75426 580 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 CYC1P08574 325 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 MLF1P58340 268 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 RPS27AP62979 156 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 UBA52P62987 128 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 OR8B12Q8NGG6 310 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ARL11Q969Q4 196 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 RTL8AQ9BWD3 113 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF106Q9H2Y7 1883 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 CATSPERDQ86XM0 798 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF285Q96NJ3 590 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 HIPK2Q9H2X6 1198 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 RGCCQ9H4X1 137 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 SPRY1O43609 319 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ICMTO60725 284 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 GRPP07492 148 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 GLI4P10075 376 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 CD82P27701 267 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 SELENOPP49908 381 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 C17orf107Q6ZR85 190 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 C22orf15Q8WYQ4 148 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 DLL4Q9NR61 685 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 MS4A18H0YCH9 400 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 NUPL2O15504 423 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 HIST1H1DP16402 221 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 EFNB2P52799 333 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 EXOSC2Q13868 293 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 MS4A18Q3C1V0 323 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ZNF574Q6ZN55 896 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 C17orf82Q86X59 251 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ST8SIA4Q92187 359 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 EDN3P14138 238 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 SERPINF1P36955 418 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 BAMBIQ13145 260 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 TRIP6Q15654 476 aaKnown RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 ENY2Q9NPA8 101 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 TMEM272A0A1B0GTI8 110 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 PNPP00491 289 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 LUMP51884 338 aaPredicted RBP5.58□□□□□ -1.52
PRKDC-202ENST00000338368 CAMK2BQ13554 666 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 LYG2Q86SG7 212 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 GALNT16Q8N428 558 aa5.58□□□□□ -1.52
PRKDC-202ENST00000338368 GPR87Q9BY21 358 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms