RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PDZD9Q8IXQ8 264 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 NPRL2Q8WTW4 380 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 RNF133Q8WVZ7 376 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 C12orf43Q96C57 262 aaKnown RBP8.81□□□□□ -1
CAPN3-202ENST00000337571 DMRTB1Q96MA1 342 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 NIPSNAP1Q9BPW8 284 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 SIRPDQ9H106 197 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 C1RLQ9NZP8 487 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 DNAJB11Q9UBS4 358 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 RHBDD3Q9Y3P4 386 aa8.81□□□□□ -1
CAPN3-202ENST00000337571 hCG_38984A0A1B0GV85 526 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 NKX6-3A6NJ46 265 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 TMEM210A6NLX4 147 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 ZNF850A8MQ14 1090 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 NDUFA7O95182 113 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 ANOS1P23352 680 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 OPRL1P41146 370 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 GMFBP60983 142 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 CSNK2BP67870 215 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 MS4A2Q01362 244 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 IKZF1Q13422 519 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 GINS1Q14691 196 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 KLHL12Q53G59 568 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 WDR38Q5JTN6 314 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 PLBD1Q6P4A8 553 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 WDR82Q6UXN9 313 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 VMO1Q7Z5L0 202 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 IQCF1Q8N6M8 205 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 PAPD5Q8NDF8 572 aaKnown RBP8.8□□□□□ -1
CAPN3-202ENST00000337571 OR5T2Q8NGG2 359 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 LRTOMTQ8WZ04 291 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 H1FXQ92522 213 aaKnown RBP8.8□□□□□ -1
CAPN3-202ENST00000337571 PIGCQ92535 297 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 ASB9Q96DX5 294 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 MED30Q96HR3 178 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 RNF170Q96K19 258 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 CHID1Q9BWS9 393 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 DNTTIP1Q9H147 329 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 HAO2Q9NYQ3 351 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 RNF114Q9Y508 228 aa8.8□□□□□ -1
CAPN3-202ENST00000337571 A0A0U1RQK1 487 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 ARRDC5A6NEK1 342 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 M0QZ24 198 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 ACOT8O14734 319 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 TIMM23O14925 209 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 PRODHO43272 600 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 KCNAB3O43448 404 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 GPR137BO60478 399 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 E2F6O75461 281 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 FAM107AO95990 144 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 PAHP00439 452 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 CST4P01036 141 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 IGHV4-59P01825 116 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 FBP1P09467 338 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 HOXB6P17509 224 aaKnown RBP8.79□□□□□ -1
CAPN3-202ENST00000337571 IER3P46695 156 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 RPS7P62081 194 aaKnown RBP8.79□□□□□ -1
CAPN3-202ENST00000337571 DEFA6Q01524 100 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 PRDX4Q13162 271 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 BLMHQ13867 455 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 ATPAF1Q5TC12 328 aaPredicted RBP8.79□□□□□ -1
CAPN3-202ENST00000337571 GDPGP1Q6ZNW5 385 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 PRSS45Q7RTY3 260 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 KRT77Q7Z794 578 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 WDR86Q86TI4 376 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 LY6G5BQ8NDX9 201 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 OR10Z1Q8NGY1 313 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 OTOSQ8NHW6 89 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 FAM81AQ8TBF8 368 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 BCAS4Q8TDM0 211 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 RPL3LQ92901 407 aaKnown RBP8.79□□□□□ -1
CAPN3-202ENST00000337571 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
CAPN3-202ENST00000337571 NIPAL2Q9H841 368 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 YY1AP1Q9H869 796 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 SNTG1Q9NSN8 517 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 VNN3Q9NY84 501 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 PDP1Q9P0J1 537 aaPredicted RBP8.79□□□□□ -1
CAPN3-202ENST00000337571 ZNF391Q9UJN7 358 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 LAMP5Q9UJQ1 280 aa8.79□□□□□ -1
CAPN3-202ENST00000337571 GSC2O15499 205 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 SELENOFO60613 162 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 OSMP13725 252 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 NDUFB7P17568 137 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 MAP2K3P46734 347 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 GABRA2P47869 451 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 TGM4P49221 684 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 SRSF4Q08170 494 aaKnown RBP8.78□□□□□ -1
CAPN3-202ENST00000337571 OXLD1Q5BKU9 147 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 SLC35D3Q5M8T2 416 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 KCTD18Q6PI47 426 aaPredicted RBP8.78□□□□□ -1
CAPN3-202ENST00000337571 COMMD2Q86X83 199 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 LDLRAD3Q86YD5 345 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 CPOQ8IVL8 374 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 ZDHHC23Q8IYP9 409 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 FAM216BQ8N7L0 139 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 CCDC197Q8NCU1 140 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 ZNF671Q8TAW3 534 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 OR5P3Q8WZ94 311 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 AMELYQ99218 206 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms