RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NPEPL1Q8NDH3 523 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 MR1Q95460 341 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 TEX101Q9BY14 249 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 WDR13Q9H1Z4 485 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 KLHDC2Q9Y2U9 406 aa11.87□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF749O43361 778 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 DDAH2O95865 285 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 SLC35E2P0CK97 266 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 CD200P41217 278 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 FUT5Q11128 374 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 FAM69BQ5VUD6 431 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 SLC43A2Q8N370 569 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PATE1Q8WXA2 126 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PIGCQ92535 297 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 NXPE3Q969Y0 559 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 SLAMF6Q96DU3 332 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 VN1R1Q9GZP7 353 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 A0A1W2PR80 420 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PRSS41Q7RTY9 318 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 ZSCAN4Q8NAM6 433 aaPredicted RBP11.86□□□□□ -0.51
COL2A1-201ENST00000337299 GDE1Q9NZC3 331 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PCOLCE2Q9UKZ9 415 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 DOCK1Q14185 1865 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PRSS37A4D1T9 235 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 MSGN1A6NI15 193 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 CLDN1O95832 211 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 TBPP20226 339 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PSMB3P49720 205 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 POLR2HP52434 150 aaKnown RBP11.86□□□□□ -0.51
COL2A1-201ENST00000337299 TCTN1Q2MV58 587 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 C9orf50Q5SZB4 431 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 TSLPQ969D9 159 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 WFIKKN1Q96NZ8 548 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 CBLN4Q9NTU7 201 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 KLK13Q9UKR3 277 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 SLC5A6Q9Y289 635 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 HSD17B6O14756 317 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 CXCL10P02778 98 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 CDX1P47902 265 aaPredicted RBP11.86□□□□□ -0.51
COL2A1-201ENST00000337299 EFNA3P52797 238 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 BTG2P78543 158 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PMP22Q01453 160 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 PDCD1Q15116 288 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 SGCBQ16585 318 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 REC114Q7Z4M0 266 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF485Q8NCK3 441 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 WDR34Q96EX3 536 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
COL2A1-201ENST00000337299 OR51I2Q9H344 312 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 R4GMQ9 66 aa11.86□□□□□ -0.51
COL2A1-201ENST00000337299 A0A087WUJ7 227 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 TRAV14DV4A0A0A6YYC5 116 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 H0Y8G0 127 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 DVL1O14640 695 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 ARPC3O15145 178 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 HOXC8P31273 242 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 FASLGP48023 281 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 TAS2R30P59541 319 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 FMODQ06828 376 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 SLC36A1Q7Z2H8 476 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 LURAP1LQ8IV03 231 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 EIF4E3Q8N5X7 224 aaKnown RBP11.85□□□□□ -0.51
COL2A1-201ENST00000337299 DTWD2Q8NBA8 298 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 FAM3CQ92520 227 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 DNAJB11Q9UBS4 358 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 FTCDNL1E5RQL4 147 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 H0YL77 283 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 BRICD5Q6PL45 260 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 C20orf196Q8IYI0 205 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 SLC38A9Q8NBW4 561 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 GNPNAT1Q96EK6 184 aaPredicted RBP11.85□□□□□ -0.51
COL2A1-201ENST00000337299 FGF22Q9HCT0 170 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 TBC1D29Q9UFV1 150 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 PRSS38A1L453 326 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 HCRTR1O43613 425 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 TBX19O60806 448 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 MOSPD3O75425 235 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 MGST1P10620 155 aaKnown RBP11.85□□□□□ -0.51
COL2A1-201ENST00000337299 IAPPP10997 89 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 BMP5P22003 454 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 CDKN3Q16667 212 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 PCK2Q16822 640 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 C1orf140Q5VVS0 124 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF611Q8N823 705 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 BCORP1Q8N888 145 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 APCDD1LQ8NCL9 501 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 OR5C1Q8NGR4 320 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 TIMM29Q9BSF4 260 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 NECAP2Q9NVZ3 263 aa11.85□□□□□ -0.51
COL2A1-201ENST00000337299 ANGPTL7O43827 346 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PGA4P0DJD7 388 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PGA5P0DJD9 388 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms