RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 LIME1Q9H400 295 aa12.87□□□□□ -0.35
CMC1-201ENST00000334841 TMEM100Q9NV29 134 aa12.87□□□□□ -0.35
CMC1-201ENST00000334841 MPC1Q9Y5U8 109 aa12.87□□□□□ -0.35
CMC1-201ENST00000334841 DCHS2Q6V1P9 2916 aa12.87□□□□□ -0.35
CMC1-201ENST00000334841 IGKV1-9A0A0C4DH69 117 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 C17orf100A8MU93 164 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 SPRY3O43610 288 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 RAF1P04049 648 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 ADH4P08319 380 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 IGFBP3P17936 291 aaPredicted RBP12.86□□□□□ -0.35
CMC1-201ENST00000334841 OR8G1Q15617 311 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 OR2Z1Q8NG97 314 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 OR51A2Q8NGJ7 313 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 NPRL2Q8WTW4 380 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 OR5P3Q8WZ94 311 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 CCL19Q99731 98 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 CACNG6Q9BXT2 260 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 NAA50Q9GZZ1 169 aaKnown RBP12.86□□□□□ -0.35
CMC1-201ENST00000334841 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
CMC1-201ENST00000334841 EXOSC4Q9NPD3 245 aaKnown RBP12.86□□□□□ -0.35
CMC1-201ENST00000334841 TXNL4BQ9NX01 149 aaKnown RBP12.86□□□□□ -0.35
CMC1-201ENST00000334841 LOC100506127A0A0U1RQW1 187 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 F5H5P2 479 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 SULT1B1O43704 296 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 ATF1P18846 271 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 FGF9P31371 208 aaPredicted RBP12.85□□□□□ -0.35
CMC1-201ENST00000334841 HSD17B12Q53GQ0 312 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 GPR107Q5VW38 600 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 MOB3CQ70IA8 216 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 WDR86Q86TI4 376 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 OR1M1Q8NGA1 313 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 OR5D14Q8NGL3 314 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 CENPOQ9BU64 300 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 RNF167Q9H6Y7 350 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 ABCB9Q9NP78 766 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 ZDHHC8Q9ULC8 765 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
CMC1-201ENST00000334841 SHISA3A0PJX4 238 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 H7C417 338 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 OVOL3O00110 214 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 AIREO43918 545 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 ARL6IP5O75915 188 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 NCR1O76036 304 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 GABARAPO95166 117 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 RAB3AP20336 220 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 AZGP1P25311 298 aaKnown RBP12.84□□□□□ -0.35
CMC1-201ENST00000334841 CALRP27797 417 aaKnown RBP12.84□□□□□ -0.35
CMC1-201ENST00000334841 THBS2P35442 1172 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 CDKN1AP38936 164 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 PPP3R1P63098 170 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 MAB21L1Q13394 359 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
CMC1-201ENST00000334841 CEACAM21Q3KPI0 293 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 TIMM50Q3ZCQ8 353 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 OR8S1Q8NH09 359 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 TRMT10AQ8TBZ6 339 aaKnown RBP12.84□□□□□ -0.35
CMC1-201ENST00000334841 TECTBQ96PL2 329 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 SORCS2Q96PQ0 1159 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 RTL8AQ9BWD3 113 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 MS4A5Q9H3V2 200 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 CKLFQ9UBR5 152 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 FBXO9Q9UK97 447 aaPredicted RBP12.84□□□□□ -0.35
CMC1-201ENST00000334841 FOXJ3Q9UPW0 622 aa12.84□□□□□ -0.35
CMC1-201ENST00000334841 NOP16Q9Y3C1 178 aaKnown RBP12.84□□□□□ -0.35
CMC1-201ENST00000334841 ABCA4P78363 2273 aa12.83□□□□□ -0.35
CMC1-201ENST00000334841 IGKV1-27A0A075B6S5 117 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
CMC1-201ENST00000334841 IGHV3-64DA0A0J9YX35 117 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 LOC100289279A0A1B0GTE1 492 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 PQLC2LA1A4F0 135 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 ALX3O95076 343 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 CD55P08174 381 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 ADRA2CP18825 462 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 TGFBR1P36897 503 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 CD200P41217 278 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 GPM6AP51674 278 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 LSM3P62310 102 aaKnown RBP12.83□□□□□ -0.36
CMC1-201ENST00000334841 TNFAIP6P98066 277 aaPredicted RBP12.83□□□□□ -0.36
CMC1-201ENST00000334841 FAM209AQ5JX71 171 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 RNF144BQ7Z419 303 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 LRRTM1Q86UE6 522 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 CLVS1Q8IUQ0 354 aaPredicted RBP12.83□□□□□ -0.36
CMC1-201ENST00000334841 SPSB1Q96BD6 273 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 OR2V2Q96R30 315 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 DIRC2Q96SL1 478 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.36
CMC1-201ENST00000334841 MICU1Q9BPX6 476 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 CXXC4Q9H2H0 198 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 PMF1-BGLAPU3KQ54 211 aa12.83□□□□□ -0.36
CMC1-201ENST00000334841 ROS1P08922 2347 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms