RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TBPL1P62380 186 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR52N4Q8NGI2 321 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR4P4Q8NGL7 312 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR10J6PQ8NGY7 276 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 FOXC2Q99958 501 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 AMBNQ9NP70 447 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PRODH2Q9UF12 536 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 J3QLW9 94 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 RNASET2O00584 256 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OGG1O15527 345 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 FZD6O60353 706 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF19P17023 458 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF30P17039 623 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 EMX1Q04741 257 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 VN1R1Q9GZP7 353 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CNIH4Q9P003 139 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 LPAR3Q9UBY5 353 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 TRAV19A0A0A6YYK7 116 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ST8SIA3O43173 380 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 GSTZ1O43708 216 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 RECQL4O94761 1208 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC25A14O95258 325 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PPP1CCP36873 323 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 HBA1P69905 142 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 GPR50Q13585 617 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 HLA-DRB5Q30154 266 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PDZD3Q86UT5 571 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 Q8WTZ3 238 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 KLRG1Q96E93 195 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 SH2D2AQ9NP31 389 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 LTBP4Q8N2S1 1624 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 TRBV20-1A0A075B6N2 111 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CLDN5O00501 218 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CDX4O14627 284 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 VENTXO95231 258 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 SPINK8P0C7L1 97 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CBLN1P23435 193 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PAX2Q02962 417 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 RING1Q06587 406 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 HFEQ30201 348 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 MFSD4AQ8N468 514 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CSF3RQ99062 836 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CACNG5Q9UF02 275 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ADAMTS5Q9UNA0 930 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CEP250Q9BV73 2442 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAM157AC9JC47 383 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 HLA-DQA1P01909 254 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 FDXRP22570 491 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF93P35789 620 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OPRD1P41143 372 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 CXCL5P42830 114 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 GRB7Q14451 532 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 SPRYD7Q5W111 196 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ABHD17CQ6PCB6 329 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMIGD1Q6UXZ0 262 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 MRGPRGQ86SM5 289 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR10G4Q8NGN3 311 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 ATOH1Q92858 354 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 LPAR5Q9H1C0 372 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLCO3A1Q9UIG8 710 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR2H2O95918 312 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 KLK3P07288 261 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PSG5Q15238 335 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM198Q66K66 360 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 TCF24Q7RTU0 167 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 MARCH1Q8TCQ1 289 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PRR14Q9BWN1 585 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 PNPOQ9NVS9 261 aa5.51□□□□□ -1.53
CDC42BPA-201ENST00000334218 RIGQ13278 110 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PPP1R1AQ13522 171 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 FNDC7Q5VTL7 733 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SBSNQ6UWP8 590 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SMIM20Q8N5G0 67 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SPPL2BQ8TCT7 592 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 KCND3Q9UK17 655 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZXDAP98168 799 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZXDBP98169 803 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PRDX1Q06830 199 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 VGLL4Q14135 290 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CSNK1A1LQ8N752 337 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR4D5Q8NGN0 318 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PIGTQ969N2 578 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 BOD1Q96IK1 185 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SEC22AQ96IW7 307 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 GABARAPL1Q9H0R8 117 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 ASB7Q9H672 318 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 APOBEC3BQ9UH17 382 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 PTPRZ1P23471 2315 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CPSF4LA6NMK7 179 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 A8MWV9 139 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 MAN2B1O00754 1011 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 SOCS5O75159 536 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 DLX6P56179 175 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 LILRA4P59901 499 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 GTF2BQ00403 316 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 NECTIN1Q15223 517 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 COMMD6Q7Z4G1 85 aa5.5□□□□□ -1.53
CDC42BPA-201ENST00000334218 CPB2Q96IY4 423 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms