RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 FDX2Q6P4F2 183 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 CDC20BQ86Y33 519 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 CBLN2Q8IUK8 224 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 OR2M7Q8NG81 312 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 OR9K2Q8NGE7 335 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 OR2I1PQ8NGU4 316 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 FGF11Q92914 225 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 TMEM45BQ96B21 275 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 RNF2Q99496 336 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 RSRP1Q9BUV0 290 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 TPPP3Q9BW30 176 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 PRR14Q9BWN1 585 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 ABCG5Q9H222 651 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 C20orf141Q9NUB4 165 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 B3GAT1Q9P2W7 334 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF69Q9UC07 566 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 STEAP1Q9UHE8 339 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 DTX4Q9Y2E6 619 aa5.35□□□□□ -1.55
SEC22A-201ENST00000309934 COA3Q9Y2R0 106 aaPredicted RBP5.35□□□□□ -1.55
SEC22A-201ENST00000309934 CROCCQ5TZA2 2017 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 TMEM8BA6NDV4 472 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF354AO60765 605 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 CCL11P51671 97 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LUMP51884 338 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SOX8P57073 446 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SLAQ13239 276 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 CLN3Q13286 438 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 FCN2Q15485 313 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MEP1BQ16820 701 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LINC00696Q6ZRV3 163 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MRPL21Q7Z2W9 205 aaKnown RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MDGA2Q7Z553 956 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF101Q8IZC7 436 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR51A2Q8NGJ7 313 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 KCNG3Q8TAE7 436 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SCARB1Q8WTV0 552 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 HPSE2Q8WWQ2 592 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZCCHC14Q8WYQ9 949 aaKnown RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 HAS2Q92819 552 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SLAMF6Q96DU3 332 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR5M11Q96RB7 305 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SRRQ9GZT4 340 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ARV1Q9H2C2 271 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 GALNT9Q9HCQ5 603 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ACKR4Q9NPB9 350 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MGAT4CQ9UBM8 478 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF629Q9UEG4 869 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 RAB22AQ9UL26 194 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SPAG17Q6Q759 2223 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SLC22A20A6NK97 555 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 HRKO00198 91 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 CDC42EP2O14613 210 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ABCD4O14678 606 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LINC00614P0C842 121 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 TBPP20226 339 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 NUTF2P61970 127 aaKnown RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 TBC1D28Q2M2D7 210 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 DPY19L4Q7Z388 723 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZAR1Q86SH2 424 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR2G2Q8NGZ5 317 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 PPP1R35Q8TAP8 253 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MISP3Q96FF7 219 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF48Q96MX3 618 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MRPL37Q9BZE1 423 aaKnown RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LINC00470Q9BZP3 86 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR51J1Q9H342 316 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ELL3Q9HB65 397 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 KCNE5Q9UJ90 142 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 NUBP2Q9Y5Y2 271 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 PLXND1Q9Y4D7 1925 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LRRK1Q38SD2 2015 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LY6G6EA0A0G2JKS1 128 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR2M5A3KFT3 312 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 GGT3PA6NGU5 568 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 F6UZH7 168 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 PRRG2O14669 202 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ITGB1BP1O14713 200 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 DLEU1O43261 78 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 NME2P1O60361 137 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 TOX4O94842 621 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 HPNP05981 417 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ITGA5P08648 1049 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LIMS3P0CW19 117 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 LIMS4P0CW20 117 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ABOP16442 354 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 NME2P22392 152 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 HLA-DMAP28067 261 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF133P52736 654 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 CLDN15P56746 228 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 RPS25P62851 125 aaKnown RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 MRPS34P82930 218 aaKnown RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 ELFN2Q5R3F8 820 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR2G6Q5TZ20 316 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR5M10Q6IEU7 315 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR52W1Q6IF63 320 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 SFXN4Q6P4A7 337 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 FAM199XQ6PEV8 388 aaPredicted RBP5.34□□□□□ -1.55
SEC22A-201ENST00000309934 CBLN3Q6UW01 205 aa5.34□□□□□ -1.55
SEC22A-201ENST00000309934 OR2W3Q7Z3T1 314 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms