RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PGLYRP3Q96LB9 341 aa20.75■□□□□ 0.91
HOXC9-201ENST00000303450 MICU1Q9BPX6 476 aa20.75■□□□□ 0.91
HOXC9-201ENST00000303450 MYOZ1Q9NP98 299 aaPredicted RBP20.75■□□□□ 0.91
HOXC9-201ENST00000303450 ISYNA1Q9NPH2 558 aa20.75■□□□□ 0.91
HOXC9-201ENST00000303450 ZNF275Q9NSD4 429 aaPredicted RBP20.75■□□□□ 0.91
HOXC9-201ENST00000303450 C14orf119Q9NWQ9 140 aa20.75■□□□□ 0.91
HOXC9-201ENST00000303450 IGHV1-69-2A0A0G2JMI3 117 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 IGHV3-64DA0A0J9YX35 117 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 CDC14BO60729 498 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 SERPINA3P01011 423 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 CD200P41217 278 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 CARTPTQ16568 116 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 CEP78Q5JTW2 689 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 PLCXD3Q63HM9 321 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 MOB3CQ70IA8 216 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 ZNF525Q8N782 197 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 CELF2-AS1Q8N7Q2 184 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 RGP1Q92546 391 aaPredicted RBP20.74■□□□□ 0.91
HOXC9-201ENST00000303450 UFD1Q92890 307 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 MGLLQ99685 303 aa20.74■□□□□ 0.91
HOXC9-201ENST00000303450 PRRC2AP48634 2157 aaKnown RBP20.74■□□□□ 0.91
HOXC9-201ENST00000303450 ANKRD61A6NGH8 418 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 LYNX1G3V0Z9 82 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 CD1AP06126 327 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 LYNX1P0DP58 116 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 COL8A2P25067 703 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 CRYBB2P43320 205 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 MRPS11P82912 194 aaKnown RBP20.73■□□□□ 0.91
HOXC9-201ENST00000303450 MLLT11Q13015 90 aaPredicted RBP20.73■□□□□ 0.91
HOXC9-201ENST00000303450 YIF1BQ5BJH7 314 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 SHEQ5VZ18 495 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 TMEM42Q69YG0 159 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 CLEC2AQ6UVW9 174 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 PRSS57Q6UWY2 283 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 PP6455Q8WZ26 134 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 OR5P3Q8WZ94 311 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 ADAT3Q96EY9 351 aaPredicted RBP20.73■□□□□ 0.91
HOXC9-201ENST00000303450 RTL8AQ9BWD3 113 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 GPR173Q9NS66 373 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 MYO9AB2RTY4 2548 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 GPR50Q13585 617 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 CEACAM21Q3KPI0 293 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 RNF170Q96K19 258 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 CHST5Q9GZS9 411 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 DLL4Q9NR61 685 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 TREM2Q9NZC2 230 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 PPP1R3CQ9UQK1 317 aa20.73■□□□□ 0.91
HOXC9-201ENST00000303450 LOC100289279A0A1B0GTE1 492 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 GATBO75879 557 aaKnown RBP20.72■□□□□ 0.91
HOXC9-201ENST00000303450 CSF3P09919 207 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 OCM2P0CE71 109 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 PCMT1P22061 227 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 SOX2P48431 317 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 PDLIM4P50479 330 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 CLEC12BQ2HXU8 276 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 HFEQ30201 348 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 DMRTC1Q5HYR2 192 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 LIPKQ5VXJ0 399 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 KCTD8Q6ZWB6 473 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 TSPAN14Q8NG11 270 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 OR13C5Q8NGS8 318 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 HPSE2Q8WWQ2 592 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 CCL17Q92583 94 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 FCGR1BQ92637 280 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 NR1H4Q96RI1 486 aaPredicted RBP20.72■□□□□ 0.91
HOXC9-201ENST00000303450 ZNF696Q9H7X3 374 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 GCM1Q9NP62 436 aa20.72■□□□□ 0.91
HOXC9-201ENST00000303450 CD2P06729 351 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 GRPP07492 148 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 GATA4P43694 442 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 DSCR9P59020 149 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 TPBGQ13641 420 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 PRAMEF6Q5VXH4 476 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 OR5A2Q8NGI9 324 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 FAM168AQ92567 244 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 YIPF5Q969M3 257 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 OPALINQ96PE5 141 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 DYSFO75923 2080 aa20.71■□□□□ 0.91
HOXC9-201ENST00000303450 TEX15Q9BXT5 2789 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 A0A087WXM4 84 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 GPM6AP51674 278 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 ARMCX4Q5H9R4 360 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 UBE2UQ5VVX9 321 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 MOGAT3Q86VF5 341 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 MS4A15Q8N5U1 240 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 TECTBQ96PL2 329 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 CHODLQ9H9P2 273 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 UFSP2Q9NUQ7 469 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 SLC7A11Q9UPY5 501 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 CACNG2Q9Y698 323 aa20.7■□□□□ 0.9
HOXC9-201ENST00000303450 MAP1AP78559 2803 aaPredicted RBP20.7■□□□□ 0.9
HOXC9-201ENST00000303450 OR5B21A6NL26 309 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 PTBP3O95758 552 aaKnown RBP20.69■□□□□ 0.9
HOXC9-201ENST00000303450 CPEP16870 476 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 THBS2P35442 1172 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 RPS11P62280 158 aaKnown RBP eCLIP20.69■□□□□ 0.9
HOXC9-201ENST00000303450 MPPED2Q15777 294 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 UBE2V2Q15819 145 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 Q499Y3 187 aa20.69■□□□□ 0.9
HOXC9-201ENST00000303450 UTS2BQ765I0 119 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms