RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FAM166BA8MTA8 275 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 B4E171 279 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 DISC1C4P0D8 188 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 DHRS3O75911 302 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 CYC1P08574 325 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 CCL2P13500 99 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 MGMTP16455 207 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 GABRR1P24046 479 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 BLVRBP30043 206 aaPredicted RBP10.28□□□□□ -0.76
RHO-201ENST00000296271 SRD5A2P31213 254 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 OTX1P32242 354 aaPredicted RBP10.28□□□□□ -0.76
RHO-201ENST00000296271 TSPAN7P41732 249 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 ATP1B3P54709 279 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 FOXO1Q12778 655 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 ARFRP1Q13795 201 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 CEACAM16Q2WEN9 425 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 NHLRC3Q5JS37 347 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 PGAP1Q75T13 922 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 AAED1Q7RTV5 226 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 CCDC120Q96HB5 630 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 ALX4Q9H161 411 aaPredicted RBP10.28□□□□□ -0.76
RHO-201ENST00000296271 SLCO5A1Q9H2Y9 848 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 LRFN1Q9P244 771 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 IL17BQ9UHF5 180 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 MAB21L2Q9Y586 359 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 EEF1E1-BLOC1S5C9J1V9 151 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 EFSO43281 561 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 SGCEO43556 437 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 SP9P0CG40 484 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 CYB561P49447 251 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 HIST1H3AP68431 136 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 IL13RA1P78552 427 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 HIST2H3PS2Q5TEC6 136 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 DHRS13Q6UX07 377 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 HIST2H3AQ71DI3 136 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 KCNG3Q8TAE7 436 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 ADGRG7Q96K78 797 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 SGCZQ96LD1 299 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 MFFQ9GZY8 342 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 RDH8Q9NYR8 311 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 UPB1Q9UBR1 384 aa10.28□□□□□ -0.76
RHO-201ENST00000296271 OR5H14A6NHG9 310 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 ZNF587BE7ETH6 402 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 MFNGO00587 321 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 SIGLEC5O15389 551 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 SYNGR3O43761 229 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 VAMP5O95183 116 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 RLN2P04090 185 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 LCATP04180 440 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 IFNA6P05013 189 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 HPNP05981 417 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 CTSSP25774 331 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 DLSTP36957 453 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 PSG4Q00888 419 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 CAMK2BQ13554 666 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 SLC9A3R2Q15599 337 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 CLLU1Q5K131 121 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 NKAPLQ5M9Q1 402 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 FAM27BQ5VT28 67 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 SLC25A42Q86VD7 318 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 SKA3Q8IX90 412 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 CCDC107Q8WV48 283 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 WBP1Q96G27 269 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 PDCD10Q9BUL8 212 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 TMPRSS13Q9BYE2 586 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 GSX2Q9BZM3 304 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 MCTS1Q9ULC4 181 aaKnown RBP10.27□□□□□ -0.76
RHO-201ENST00000296271 V9GYS6 101 aa10.27□□□□□ -0.76
RHO-201ENST00000296271 A0A096LPE4 126 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 A0A1W2PPZ6 126 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 FAM221AA4D161 298 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 CDX4O14627 284 aaPredicted RBP10.27□□□□□ -0.77
RHO-201ENST00000296271 NEURL1O76050 574 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 CD59P13987 128 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 CRYGSP22914 178 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 ZNF133P52736 654 aaPredicted RBP10.27□□□□□ -0.77
RHO-201ENST00000296271 RRADP55042 308 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 RPS27AP62979 156 aaKnown RBP10.27□□□□□ -0.77
RHO-201ENST00000296271 ECH1Q13011 328 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 SSPNQ14714 243 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 C5orf24Q7Z6I8 188 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 LYG2Q86SG7 212 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 NAXDQ8IW45 347 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 ARMC10Q8N2F6 343 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 OR5M8Q8NGP6 311 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 PPP1R1CQ8WVI7 109 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 TMEM230Q96A57 120 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 PRRT1Q99946 306 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 SPRY4Q9C004 299 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 OR10A2Q9H208 303 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 TMEM38BQ9NVV0 291 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 CRIM1Q9NZV1 1036 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 SHANK1Q9Y566 2161 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 PCDHGA1Q9Y5H4 931 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 PRR14LQ5THK1 2151 aa10.27□□□□□ -0.77
RHO-201ENST00000296271 C13orf42A0A1B0GVH6 325 aa10.26□□□□□ -0.77
RHO-201ENST00000296271 LGALS8O00214 317 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms